FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629039_at:

>probe:Drosophila_2:1629039_at:496:513; Interrogation_Position=489; Antisense; GTGATGGGCGTCATTCTGGGCTACT
>probe:Drosophila_2:1629039_at:382:525; Interrogation_Position=518; Antisense; GGGCAAGTTCAGTTACCAGCAGAAG
>probe:Drosophila_2:1629039_at:209:83; Interrogation_Position=607; Antisense; AGGGCGGCGGTGTCATCAGCTCCAT
>probe:Drosophila_2:1629039_at:407:33; Interrogation_Position=630; Antisense; ATCACACCGGACGAGAATCTGGGCA
>probe:Drosophila_2:1629039_at:594:481; Interrogation_Position=713; Antisense; GTATCAGCCCGGGAGGAGCACTTCT
>probe:Drosophila_2:1629039_at:86:77; Interrogation_Position=726; Antisense; AGGAGCACTTCTCTCAATCTGGACA
>probe:Drosophila_2:1629039_at:609:237; Interrogation_Position=741; Antisense; AATCTGGACACGGAATCGCGCCCTA
>probe:Drosophila_2:1629039_at:722:299; Interrogation_Position=799; Antisense; CCCTGGACTCTGGTTCAATGCTGGA
>probe:Drosophila_2:1629039_at:140:101; Interrogation_Position=827; Antisense; AGAGTTGCCCTTGGAGCCGTCTAAG
>probe:Drosophila_2:1629039_at:274:651; Interrogation_Position=848; Antisense; TAAGCCGGGCCAGTCTTACGAGGAC
>probe:Drosophila_2:1629039_at:235:637; Interrogation_Position=900; Antisense; TCGAAGCACCAGCAGAGTCCATACT
>probe:Drosophila_2:1629039_at:291:639; Interrogation_Position=932; Antisense; TTACGAACCACCAGTTGCCGTTCAA
>probe:Drosophila_2:1629039_at:475:325; Interrogation_Position=959; Antisense; GCGACCCGTGGAGCAGGCACAAAGT
>probe:Drosophila_2:1629039_at:275:377; Interrogation_Position=998; Antisense; GAAGAACCAATACGGCGACTCCTGG

Paste this into a BLAST search page for me
GTGATGGGCGTCATTCTGGGCTACTGGGCAAGTTCAGTTACCAGCAGAAGAGGGCGGCGGTGTCATCAGCTCCATATCACACCGGACGAGAATCTGGGCAGTATCAGCCCGGGAGGAGCACTTCTAGGAGCACTTCTCTCAATCTGGACAAATCTGGACACGGAATCGCGCCCTACCCTGGACTCTGGTTCAATGCTGGAAGAGTTGCCCTTGGAGCCGTCTAAGTAAGCCGGGCCAGTCTTACGAGGACTCGAAGCACCAGCAGAGTCCATACTTTACGAACCACCAGTTGCCGTTCAAGCGACCCGTGGAGCAGGCACAAAGTGAAGAACCAATACGGCGACTCCTGG

Full Affymetrix probeset data:

Annotations for 1629039_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720