FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629061_s_at:

>probe:Drosophila_2:1629061_s_at:507:223; Interrogation_Position=1379; Antisense; AAGGATGGCTACAAACTCACCCTGG
>probe:Drosophila_2:1629061_s_at:641:191; Interrogation_Position=1392; Antisense; AACTCACCCTGGACGTCAAGGACTA
>probe:Drosophila_2:1629061_s_at:102:409; Interrogation_Position=1403; Antisense; GACGTCAAGGACTACAGCGAGCTAA
>probe:Drosophila_2:1629061_s_at:180:223; Interrogation_Position=1494; Antisense; AAGGTGGCTATAGCTCCAGGCACTT
>probe:Drosophila_2:1629061_s_at:703:715; Interrogation_Position=1529; Antisense; TTCGTCCTGCCGGAAGGATACGAGG
>probe:Drosophila_2:1629061_s_at:301:81; Interrogation_Position=1560; Antisense; AGGTGACCTCAACGCTGAGCAGCGA
>probe:Drosophila_2:1629061_s_at:502:405; Interrogation_Position=1583; Antisense; GACGGCGTCCTGACCATCAGTGTGC
>probe:Drosophila_2:1629061_s_at:550:651; Interrogation_Position=1635; Antisense; TCAAGGAGCGTGAGGTGACCATCGA
>probe:Drosophila_2:1629061_s_at:654:43; Interrogation_Position=1655; Antisense; ATCGAGCAGACTGGCGAGCCGGCAA
>probe:Drosophila_2:1629061_s_at:77:555; Interrogation_Position=1693; Antisense; GGAGCCAAATGACAAAGCCGCCAGT
>probe:Drosophila_2:1629061_s_at:205:257; Interrogation_Position=1705; Antisense; CAAAGCCGCCAGTCAGTAGAAATAA
>probe:Drosophila_2:1629061_s_at:439:381; Interrogation_Position=1764; Antisense; GAACTCCTATGTTTAGATATTCCAA
>probe:Drosophila_2:1629061_s_at:166:185; Interrogation_Position=1835; Antisense; AACAATTGTGATTCGGTAGCCCGCA
>probe:Drosophila_2:1629061_s_at:373:123; Interrogation_Position=1852; Antisense; AGCCCGCAAGCCCAATATTTTTATG

Paste this into a BLAST search page for me
AAGGATGGCTACAAACTCACCCTGGAACTCACCCTGGACGTCAAGGACTAGACGTCAAGGACTACAGCGAGCTAAAAGGTGGCTATAGCTCCAGGCACTTTTCGTCCTGCCGGAAGGATACGAGGAGGTGACCTCAACGCTGAGCAGCGAGACGGCGTCCTGACCATCAGTGTGCTCAAGGAGCGTGAGGTGACCATCGAATCGAGCAGACTGGCGAGCCGGCAAGGAGCCAAATGACAAAGCCGCCAGTCAAAGCCGCCAGTCAGTAGAAATAAGAACTCCTATGTTTAGATATTCCAAAACAATTGTGATTCGGTAGCCCGCAAGCCCGCAAGCCCAATATTTTTATG

Full Affymetrix probeset data:

Annotations for 1629061_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720