FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629065_s_at:

>probe:Drosophila_2:1629065_s_at:285:203; Interrogation_Position=1634; Antisense; AAGCCCCGAAAATCATCAATGTCTG
>probe:Drosophila_2:1629065_s_at:15:101; Interrogation_Position=1681; Antisense; AGAGAATACACACTGCTTAGCACGC
>probe:Drosophila_2:1629065_s_at:697:703; Interrogation_Position=1697; Antisense; TTAGCACGCGACACTTAATACCCAT
>probe:Drosophila_2:1629065_s_at:499:645; Interrogation_Position=1722; Antisense; TCATTACACATGCACCAACGACGAT
>probe:Drosophila_2:1629065_s_at:116:297; Interrogation_Position=1740; Antisense; CGACGATGAAGTTTTGCCAAGTAGC
>probe:Drosophila_2:1629065_s_at:462:483; Interrogation_Position=1760; Antisense; GTAGCTAAGTTTGTTGACCTGACCA
>probe:Drosophila_2:1629065_s_at:465:131; Interrogation_Position=1776; Antisense; ACCTGACCATCAAGTGCAGCTTTCA
>probe:Drosophila_2:1629065_s_at:352:275; Interrogation_Position=1795; Antisense; CTTTCACACCCTCATATAACTACTT
>probe:Drosophila_2:1629065_s_at:523:283; Interrogation_Position=1895; Antisense; CTGCGCCATCATATCAGGCTCTAAA
>probe:Drosophila_2:1629065_s_at:175:471; Interrogation_Position=1934; Antisense; GTTCAAACACACGACTAGCATACAG
>probe:Drosophila_2:1629065_s_at:304:379; Interrogation_Position=1981; Antisense; GAACCTTGTATTCGCATGTTCGCCA
>probe:Drosophila_2:1629065_s_at:687:347; Interrogation_Position=1994; Antisense; GCATGTTCGCCAATGTTCATAGTGT
>probe:Drosophila_2:1629065_s_at:465:473; Interrogation_Position=2008; Antisense; GTTCATAGTGTATTCTTCAAGCTCA
>probe:Drosophila_2:1629065_s_at:34:711; Interrogation_Position=2023; Antisense; TTCAAGCTCATTTTCTAACCAAGTT

Paste this into a BLAST search page for me
AAGCCCCGAAAATCATCAATGTCTGAGAGAATACACACTGCTTAGCACGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATCGACGATGAAGTTTTGCCAAGTAGCGTAGCTAAGTTTGTTGACCTGACCAACCTGACCATCAAGTGCAGCTTTCACTTTCACACCCTCATATAACTACTTCTGCGCCATCATATCAGGCTCTAAAGTTCAAACACACGACTAGCATACAGGAACCTTGTATTCGCATGTTCGCCAGCATGTTCGCCAATGTTCATAGTGTGTTCATAGTGTATTCTTCAAGCTCATTCAAGCTCATTTTCTAACCAAGTT

Full Affymetrix probeset data:

Annotations for 1629065_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720