FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629086_s_at:

>probe:Drosophila_2:1629086_s_at:410:395; Interrogation_Position=2026; Antisense; GACAACGAAGTCTCTACTGTTCCAC
>probe:Drosophila_2:1629086_s_at:480:309; Interrogation_Position=2050; Antisense; CCAGCGATTCGCTCCTATTAAATCA
>probe:Drosophila_2:1629086_s_at:110:589; Interrogation_Position=2080; Antisense; TGGAGTTGCAGAACACCCGCATATA
>probe:Drosophila_2:1629086_s_at:703:33; Interrogation_Position=2116; Antisense; ATCACTCGTACGGATGTCTACTTAA
>probe:Drosophila_2:1629086_s_at:117:149; Interrogation_Position=2135; Antisense; ACTTAAACGTCTTTGTGGGCGCCAG
>probe:Drosophila_2:1629086_s_at:120:495; Interrogation_Position=2172; Antisense; GTCAAATCGCCAAATGAGCCGCAAT
>probe:Drosophila_2:1629086_s_at:65:417; Interrogation_Position=2187; Antisense; GAGCCGCAATATGCTACCAATTGGT
>probe:Drosophila_2:1629086_s_at:532:491; Interrogation_Position=2210; Antisense; GTAACTGGGAACTCGGCAGCGGTTC
>probe:Drosophila_2:1629086_s_at:244:331; Interrogation_Position=2228; Antisense; GCGGTTCCGGGCATTTTGTGATGAA
>probe:Drosophila_2:1629086_s_at:422:11; Interrogation_Position=2299; Antisense; ATTACTACTCCGCTGATTCTACTTA
>probe:Drosophila_2:1629086_s_at:83:707; Interrogation_Position=2321; Antisense; TTAGTTTCACTGTAAGCTGCCCTCC
>probe:Drosophila_2:1629086_s_at:113:321; Interrogation_Position=2339; Antisense; GCCCTCCATTTGGTTACTGTTTGGT
>probe:Drosophila_2:1629086_s_at:278:149; Interrogation_Position=2411; Antisense; ACAACGAGTTAGGTCTGAGGCGATA
>probe:Drosophila_2:1629086_s_at:201:293; Interrogation_Position=2431; Antisense; CGATATTGACTACGCAGCCTGTTTA

Paste this into a BLAST search page for me
GACAACGAAGTCTCTACTGTTCCACCCAGCGATTCGCTCCTATTAAATCATGGAGTTGCAGAACACCCGCATATAATCACTCGTACGGATGTCTACTTAAACTTAAACGTCTTTGTGGGCGCCAGGTCAAATCGCCAAATGAGCCGCAATGAGCCGCAATATGCTACCAATTGGTGTAACTGGGAACTCGGCAGCGGTTCGCGGTTCCGGGCATTTTGTGATGAAATTACTACTCCGCTGATTCTACTTATTAGTTTCACTGTAAGCTGCCCTCCGCCCTCCATTTGGTTACTGTTTGGTACAACGAGTTAGGTCTGAGGCGATACGATATTGACTACGCAGCCTGTTTA

Full Affymetrix probeset data:

Annotations for 1629086_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720