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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629095_a_at:

>probe:Drosophila_2:1629095_a_at:111:417; Interrogation_Position=2431; Antisense; GAGCTGGTCTCCAAGGACGACCTGG
>probe:Drosophila_2:1629095_a_at:211:223; Interrogation_Position=2458; Antisense; AAGGGCAGCTTGTATCCACCACTCA
>probe:Drosophila_2:1629095_a_at:643:5; Interrogation_Position=2488; Antisense; ATTGTCAGCTGTTCGATGGCCATTG
>probe:Drosophila_2:1629095_a_at:411:197; Interrogation_Position=2542; Antisense; AACGGATTGGCCACTGTTCGTCCAG
>probe:Drosophila_2:1629095_a_at:506:601; Interrogation_Position=2556; Antisense; TGTTCGTCCAGAGCCGGTCAATAAG
>probe:Drosophila_2:1629095_a_at:599:31; Interrogation_Position=2576; Antisense; ATAAGCTGGCGTTCATCAAGGCCCA
>probe:Drosophila_2:1629095_a_at:224:61; Interrogation_Position=2602; Antisense; ATGTACGATCTGGACTATCCCCGAT
>probe:Drosophila_2:1629095_a_at:230:507; Interrogation_Position=2629; Antisense; GTGCCCGCCACCTATAAGATGTAGA
>probe:Drosophila_2:1629095_a_at:694:265; Interrogation_Position=2661; Antisense; CAGATGATGAGGATCCATTCCGCCT
>probe:Drosophila_2:1629095_a_at:57:575; Interrogation_Position=2732; Antisense; GGCGGCGAGCAGTAACCATGTTATT
>probe:Drosophila_2:1629095_a_at:94:231; Interrogation_Position=2765; Antisense; AATGTCGCACATTTGTCGTCTAGCA
>probe:Drosophila_2:1629095_a_at:50:685; Interrogation_Position=2793; Antisense; TATCCAAATTTGTATCGCGGCTAAT
>probe:Drosophila_2:1629095_a_at:48:67; Interrogation_Position=2875; Antisense; ATGGAATGTCATCAGCTTGCGGCGC
>probe:Drosophila_2:1629095_a_at:479:275; Interrogation_Position=2890; Antisense; CTTGCGGCGCGCGATTTTGTATAAT

Paste this into a BLAST search page for me
GAGCTGGTCTCCAAGGACGACCTGGAAGGGCAGCTTGTATCCACCACTCAATTGTCAGCTGTTCGATGGCCATTGAACGGATTGGCCACTGTTCGTCCAGTGTTCGTCCAGAGCCGGTCAATAAGATAAGCTGGCGTTCATCAAGGCCCAATGTACGATCTGGACTATCCCCGATGTGCCCGCCACCTATAAGATGTAGACAGATGATGAGGATCCATTCCGCCTGGCGGCGAGCAGTAACCATGTTATTAATGTCGCACATTTGTCGTCTAGCATATCCAAATTTGTATCGCGGCTAATATGGAATGTCATCAGCTTGCGGCGCCTTGCGGCGCGCGATTTTGTATAAT

Full Affymetrix probeset data:

Annotations for 1629095_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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