FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629141_at:

>probe:Drosophila_2:1629141_at:491:161; Interrogation_Position=6792; Antisense; AAATAACACACCTTTCCGTAGATGG
>probe:Drosophila_2:1629141_at:321:441; Interrogation_Position=6812; Antisense; GATGGATGACACCTTTTCTTCTTGG
>probe:Drosophila_2:1629141_at:591:677; Interrogation_Position=6868; Antisense; TAGAGCCTAATTTTCAATTCTCAAT
>probe:Drosophila_2:1629141_at:640:245; Interrogation_Position=6883; Antisense; AATTCTCAATTGTTCGACGATTAGG
>probe:Drosophila_2:1629141_at:128:471; Interrogation_Position=6894; Antisense; GTTCGACGATTAGGCAAACGACTAT
>probe:Drosophila_2:1629141_at:413:343; Interrogation_Position=6945; Antisense; GCTTAATTTGCTAAGAACGAGCCAA
>probe:Drosophila_2:1629141_at:596:179; Interrogation_Position=6968; Antisense; AAAAAGATTGCTAACCGCCTTCACG
>probe:Drosophila_2:1629141_at:245:133; Interrogation_Position=6981; Antisense; ACCGCCTTCACGATTCTTTGTTCAA
>probe:Drosophila_2:1629141_at:728:129; Interrogation_Position=7017; Antisense; ACCCTAACCGCGCATGTATAATACC
>probe:Drosophila_2:1629141_at:174:237; Interrogation_Position=7036; Antisense; AATACCAATAGTTTCGATTAAGCCT
>probe:Drosophila_2:1629141_at:59:155; Interrogation_Position=7055; Antisense; AAGCCTATTTATGTTTACGTATTCG
>probe:Drosophila_2:1629141_at:594:663; Interrogation_Position=7111; Antisense; TAAATTAATGCACTAGAGCCTCTAA
>probe:Drosophila_2:1629141_at:312:147; Interrogation_Position=7122; Antisense; ACTAGAGCCTCTAACGCAATACAAA
>probe:Drosophila_2:1629141_at:476:103; Interrogation_Position=7326; Antisense; AACTTATAACTCATACCTACTACGT

Paste this into a BLAST search page for me
AAATAACACACCTTTCCGTAGATGGGATGGATGACACCTTTTCTTCTTGGTAGAGCCTAATTTTCAATTCTCAATAATTCTCAATTGTTCGACGATTAGGGTTCGACGATTAGGCAAACGACTATGCTTAATTTGCTAAGAACGAGCCAAAAAAAGATTGCTAACCGCCTTCACGACCGCCTTCACGATTCTTTGTTCAAACCCTAACCGCGCATGTATAATACCAATACCAATAGTTTCGATTAAGCCTAAGCCTATTTATGTTTACGTATTCGTAAATTAATGCACTAGAGCCTCTAAACTAGAGCCTCTAACGCAATACAAAAACTTATAACTCATACCTACTACGT

Full Affymetrix probeset data:

Annotations for 1629141_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720