FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629229_a_at:

>probe:Drosophila_2:1629229_a_at:463:399; Interrogation_Position=3896; Antisense; GACACGCTGTATGTCGCACGACCAA
>probe:Drosophila_2:1629229_a_at:81:295; Interrogation_Position=3914; Antisense; CGACCAAAGATTCTGTTGTTACATT
>probe:Drosophila_2:1629229_a_at:133:475; Interrogation_Position=3931; Antisense; GTTACATTAATCTCATAGCTCCAAA
>probe:Drosophila_2:1629229_a_at:264:317; Interrogation_Position=3965; Antisense; GCCTGTATACCAAGAGCAGTTCTCA
>probe:Drosophila_2:1629229_a_at:613:471; Interrogation_Position=3983; Antisense; GTTCTCAAAGAACACTCATCTATCT
>probe:Drosophila_2:1629229_a_at:455:365; Interrogation_Position=4018; Antisense; GAATCATTAGTTGTACATACGGTCT
>probe:Drosophila_2:1629229_a_at:278:151; Interrogation_Position=4032; Antisense; ACATACGGTCTAAATCGATTGATAC
>probe:Drosophila_2:1629229_a_at:495:463; Interrogation_Position=4048; Antisense; GATTGATACTTACATTTTCGTCGAA
>probe:Drosophila_2:1629229_a_at:274:695; Interrogation_Position=4063; Antisense; TTTCGTCGAATTTTAATGGTCCACT
>probe:Drosophila_2:1629229_a_at:417:63; Interrogation_Position=4078; Antisense; ATGGTCCACTACTCGAAATTTGTTA
>probe:Drosophila_2:1629229_a_at:196:635; Interrogation_Position=4197; Antisense; TCGAATACCTTTTGAGATTTCCTAC
>probe:Drosophila_2:1629229_a_at:570:459; Interrogation_Position=4212; Antisense; GATTTCCTACAATCAAATTCCACTT
>probe:Drosophila_2:1629229_a_at:222:9; Interrogation_Position=4228; Antisense; ATTCCACTTAGATATTAGCCACAAA
>probe:Drosophila_2:1629229_a_at:470:373; Interrogation_Position=4307; Antisense; GAAGTAACCAATAATCTCATGCAAT

Paste this into a BLAST search page for me
GACACGCTGTATGTCGCACGACCAACGACCAAAGATTCTGTTGTTACATTGTTACATTAATCTCATAGCTCCAAAGCCTGTATACCAAGAGCAGTTCTCAGTTCTCAAAGAACACTCATCTATCTGAATCATTAGTTGTACATACGGTCTACATACGGTCTAAATCGATTGATACGATTGATACTTACATTTTCGTCGAATTTCGTCGAATTTTAATGGTCCACTATGGTCCACTACTCGAAATTTGTTATCGAATACCTTTTGAGATTTCCTACGATTTCCTACAATCAAATTCCACTTATTCCACTTAGATATTAGCCACAAAGAAGTAACCAATAATCTCATGCAAT

Full Affymetrix probeset data:

Annotations for 1629229_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720