FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629239_s_at:

>probe:Drosophila_2:1629239_s_at:334:427; Interrogation_Position=1165; Antisense; GAGATGTCAGTGGACGCATCGCCAT
>probe:Drosophila_2:1629239_s_at:164:557; Interrogation_Position=1322; Antisense; GGACGAGTCGCCCATCGATGAGATC
>probe:Drosophila_2:1629239_s_at:298:467; Interrogation_Position=1347; Antisense; GTTGTAACCAATACCATTCCACACG
>probe:Drosophila_2:1629239_s_at:242:427; Interrogation_Position=1371; Antisense; GAGATCCAAAAGCTGCAGTGCCATA
>probe:Drosophila_2:1629239_s_at:119:213; Interrogation_Position=1401; Antisense; AAGACGATCGACATCTCCATTCTGA
>probe:Drosophila_2:1629239_s_at:258:11; Interrogation_Position=1437; Antisense; ATTCGCCGCATTCACAACAAGGAGT
>probe:Drosophila_2:1629239_s_at:672:61; Interrogation_Position=1464; Antisense; ATGTCCTATCTGTTCCGCAACGTAA
>probe:Drosophila_2:1629239_s_at:449:25; Interrogation_Position=1543; Antisense; ATAGTGTTGCAACCGACCCGTTTTG
>probe:Drosophila_2:1629239_s_at:593:105; Interrogation_Position=1596; Antisense; AGACATCAATTCAACGAGCGCCCAG
>probe:Drosophila_2:1629239_s_at:215:59; Interrogation_Position=1659; Antisense; ATGTAGCACACTTTTAGGCCTCACA
>probe:Drosophila_2:1629239_s_at:303:679; Interrogation_Position=1673; Antisense; TAGGCCTCACATATACTCAACACTG
>probe:Drosophila_2:1629239_s_at:684:185; Interrogation_Position=1691; Antisense; AACACTGTCCTACATGTTGTGCGTT
>probe:Drosophila_2:1629239_s_at:123:467; Interrogation_Position=1706; Antisense; GTTGTGCGTTCATCTAAGGCTAGCC
>probe:Drosophila_2:1629239_s_at:336:675; Interrogation_Position=1726; Antisense; TAGCCACTTCCTTCTAGTTCGTAAG

Paste this into a BLAST search page for me
GAGATGTCAGTGGACGCATCGCCATGGACGAGTCGCCCATCGATGAGATCGTTGTAACCAATACCATTCCACACGGAGATCCAAAAGCTGCAGTGCCATAAAGACGATCGACATCTCCATTCTGAATTCGCCGCATTCACAACAAGGAGTATGTCCTATCTGTTCCGCAACGTAAATAGTGTTGCAACCGACCCGTTTTGAGACATCAATTCAACGAGCGCCCAGATGTAGCACACTTTTAGGCCTCACATAGGCCTCACATATACTCAACACTGAACACTGTCCTACATGTTGTGCGTTGTTGTGCGTTCATCTAAGGCTAGCCTAGCCACTTCCTTCTAGTTCGTAAG

Full Affymetrix probeset data:

Annotations for 1629239_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720