FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629256_a_at:

>probe:Drosophila_2:1629256_a_at:233:423; Interrogation_Position=3413; Antisense; GAGAAGACGAATCGCCAGCTGCGCA
>probe:Drosophila_2:1629256_a_at:206:625; Interrogation_Position=3432; Antisense; TGCGCATCCATGAGCTGGTGGTCAA
>probe:Drosophila_2:1629256_a_at:61:533; Interrogation_Position=3448; Antisense; GGTGGTCAAGCACTCATCAAACGCT
>probe:Drosophila_2:1629256_a_at:38:653; Interrogation_Position=3464; Antisense; TCAAACGCTTCCCTGGTGGTCATGT
>probe:Drosophila_2:1629256_a_at:513:567; Interrogation_Position=3520; Antisense; GGCACCGCTGTACATGTCATGGCTG
>probe:Drosophila_2:1629256_a_at:320:287; Interrogation_Position=3542; Antisense; CTGGAGATGCTCACGTCGGACATGA
>probe:Drosophila_2:1629256_a_at:18:633; Interrogation_Position=3634; Antisense; TCGCTTCCAGTTCGAGTACAACTTA
>probe:Drosophila_2:1629256_a_at:435:669; Interrogation_Position=3666; Antisense; TAGCGTTTAGGTGGTCCAGTTCCCA
>probe:Drosophila_2:1629256_a_at:137:301; Interrogation_Position=3694; Antisense; CCCGGTAGAATCGAATCAGTCCCTT
>probe:Drosophila_2:1629256_a_at:405:95; Interrogation_Position=3726; Antisense; AGTTGTGCAATGTGCCGCCGAATCA
>probe:Drosophila_2:1629256_a_at:98:417; Interrogation_Position=3764; Antisense; GAGCCCAGACTCTCGTTCTAAGAGA
>probe:Drosophila_2:1629256_a_at:219:255; Interrogation_Position=3795; Antisense; CACTTCTTACTTACGTACTCCTTTG
>probe:Drosophila_2:1629256_a_at:656:669; Interrogation_Position=3810; Antisense; TACTCCTTTGTACGATCGAACTCCT
>probe:Drosophila_2:1629256_a_at:293:451; Interrogation_Position=3823; Antisense; GATCGAACTCCTAAACGCTTGCAAT

Paste this into a BLAST search page for me
GAGAAGACGAATCGCCAGCTGCGCATGCGCATCCATGAGCTGGTGGTCAAGGTGGTCAAGCACTCATCAAACGCTTCAAACGCTTCCCTGGTGGTCATGTGGCACCGCTGTACATGTCATGGCTGCTGGAGATGCTCACGTCGGACATGATCGCTTCCAGTTCGAGTACAACTTATAGCGTTTAGGTGGTCCAGTTCCCACCCGGTAGAATCGAATCAGTCCCTTAGTTGTGCAATGTGCCGCCGAATCAGAGCCCAGACTCTCGTTCTAAGAGACACTTCTTACTTACGTACTCCTTTGTACTCCTTTGTACGATCGAACTCCTGATCGAACTCCTAAACGCTTGCAAT

Full Affymetrix probeset data:

Annotations for 1629256_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720