FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629288_s_at:

>probe:Drosophila_2:1629288_s_at:91:65; Interrogation_Position=1042; Antisense; ATGGACTGCCGACCCACCGACTTGG
>probe:Drosophila_2:1629288_s_at:129:133; Interrogation_Position=1057; Antisense; ACCGACTTGGGCCTGCTGGATCTCC
>probe:Drosophila_2:1629288_s_at:243:169; Interrogation_Position=1137; Antisense; AAAGGCGAAAGTGGAGTCTGACCAA
>probe:Drosophila_2:1629288_s_at:726:587; Interrogation_Position=1148; Antisense; TGGAGTCTGACCAAAGTGCCAAGCC
>probe:Drosophila_2:1629288_s_at:190:439; Interrogation_Position=1294; Antisense; GAGGAATCCTCAGAAGAAAGCAACT
>probe:Drosophila_2:1629288_s_at:512:263; Interrogation_Position=1304; Antisense; CAGAAGAAAGCAACTCATCGGAAGA
>probe:Drosophila_2:1629288_s_at:305:155; Interrogation_Position=1352; Antisense; ACAGCGACAGCGATGTCTCCAGTGA
>probe:Drosophila_2:1629288_s_at:113:155; Interrogation_Position=1358; Antisense; ACAGCGATGTCTCCAGTGATCACGG
>probe:Drosophila_2:1629288_s_at:592:511; Interrogation_Position=1373; Antisense; GTGATCACGGCCACCGGAAGAGGAA
>probe:Drosophila_2:1629288_s_at:542:311; Interrogation_Position=1382; Antisense; GCCACCGGAAGAGGAAGCCAATGAA
>probe:Drosophila_2:1629288_s_at:228:443; Interrogation_Position=1539; Antisense; GATGAACTGTCGATTTGGCTGGGAT
>probe:Drosophila_2:1629288_s_at:121:195; Interrogation_Position=1543; Antisense; AACTGTCGATTTGGCTGGGATGAAC
>probe:Drosophila_2:1629288_s_at:22:49; Interrogation_Position=1574; Antisense; ATGAATAAATACCTCTGAACTTAAG
>probe:Drosophila_2:1629288_s_at:604:709; Interrogation_Position=1594; Antisense; TTAAGAAGTTCGATCTCATTAACGA

Paste this into a BLAST search page for me
ATGGACTGCCGACCCACCGACTTGGACCGACTTGGGCCTGCTGGATCTCCAAAGGCGAAAGTGGAGTCTGACCAATGGAGTCTGACCAAAGTGCCAAGCCGAGGAATCCTCAGAAGAAAGCAACTCAGAAGAAAGCAACTCATCGGAAGAACAGCGACAGCGATGTCTCCAGTGAACAGCGATGTCTCCAGTGATCACGGGTGATCACGGCCACCGGAAGAGGAAGCCACCGGAAGAGGAAGCCAATGAAGATGAACTGTCGATTTGGCTGGGATAACTGTCGATTTGGCTGGGATGAACATGAATAAATACCTCTGAACTTAAGTTAAGAAGTTCGATCTCATTAACGA

Full Affymetrix probeset data:

Annotations for 1629288_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720