FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629307_s_at:

>probe:Drosophila_2:1629307_s_at:190:137; Interrogation_Position=4018; Antisense; ACGACATCTTCACCGATCTCCTGTG
>probe:Drosophila_2:1629307_s_at:129:293; Interrogation_Position=4031; Antisense; CGATCTCCTGTGCAACCTGAGCATC
>probe:Drosophila_2:1629307_s_at:465:35; Interrogation_Position=4053; Antisense; ATCAGTCAGGACAACAGCAGCCAGC
>probe:Drosophila_2:1629307_s_at:665:69; Interrogation_Position=4078; Antisense; AGGCCAGCAGCAAGGCTGATGCCTC
>probe:Drosophila_2:1629307_s_at:12:607; Interrogation_Position=4094; Antisense; TGATGCCTCCGACGTCAGCTCGAAT
>probe:Drosophila_2:1629307_s_at:50:575; Interrogation_Position=4148; Antisense; GGCGGCCAATATCTGGAGGTTTCCA
>probe:Drosophila_2:1629307_s_at:163:435; Interrogation_Position=4163; Antisense; GAGGTTTCCAGAGTACGCCAGTAGT
>probe:Drosophila_2:1629307_s_at:330:487; Interrogation_Position=4175; Antisense; GTACGCCAGTAGTCAGCTCTACATG
>probe:Drosophila_2:1629307_s_at:245:89; Interrogation_Position=4185; Antisense; AGTCAGCTCTACATGGAGGAGCCAA
>probe:Drosophila_2:1629307_s_at:104:119; Interrogation_Position=4234; Antisense; AGCTCTTCAACGACTATCTCAACAT
>probe:Drosophila_2:1629307_s_at:293:283; Interrogation_Position=4292; Antisense; CTGCCGCATTTGTTACTCTAGCTAA
>probe:Drosophila_2:1629307_s_at:696:425; Interrogation_Position=4360; Antisense; GAGAGGCCGTATACGAGCCAACTCT
>probe:Drosophila_2:1629307_s_at:534:415; Interrogation_Position=4374; Antisense; GAGCCAACTCTCCTGAAGCGAGTGT
>probe:Drosophila_2:1629307_s_at:602:709; Interrogation_Position=4519; Antisense; TTCTTTGTTTACACACACCTACCTA

Paste this into a BLAST search page for me
ACGACATCTTCACCGATCTCCTGTGCGATCTCCTGTGCAACCTGAGCATCATCAGTCAGGACAACAGCAGCCAGCAGGCCAGCAGCAAGGCTGATGCCTCTGATGCCTCCGACGTCAGCTCGAATGGCGGCCAATATCTGGAGGTTTCCAGAGGTTTCCAGAGTACGCCAGTAGTGTACGCCAGTAGTCAGCTCTACATGAGTCAGCTCTACATGGAGGAGCCAAAGCTCTTCAACGACTATCTCAACATCTGCCGCATTTGTTACTCTAGCTAAGAGAGGCCGTATACGAGCCAACTCTGAGCCAACTCTCCTGAAGCGAGTGTTTCTTTGTTTACACACACCTACCTA

Full Affymetrix probeset data:

Annotations for 1629307_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720