FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629372_a_at:

>probe:Drosophila_2:1629372_a_at:229:373; Interrogation_Position=5091; Antisense; GAAGTGTCCTTAGGCGTGTGTTCAT
>probe:Drosophila_2:1629372_a_at:619:49; Interrogation_Position=5114; Antisense; ATGCGCATCGGTCCAGTATTCAATA
>probe:Drosophila_2:1629372_a_at:35:583; Interrogation_Position=5178; Antisense; TGGCTAGCTGACTCGGCCATGTTAA
>probe:Drosophila_2:1629372_a_at:3:315; Interrogation_Position=5193; Antisense; GCCATGTTAATAGATCGATTCCCGA
>probe:Drosophila_2:1629372_a_at:575:293; Interrogation_Position=5224; Antisense; CGAAATCCCCTCAAATCGTAGTTCA
>probe:Drosophila_2:1629372_a_at:366:237; Interrogation_Position=5237; Antisense; AATCGTAGTTCATAGTGGGCCCTCT
>probe:Drosophila_2:1629372_a_at:219:639; Interrogation_Position=5269; Antisense; TCGGCTTTGTTGTTATGTTGGCACT
>probe:Drosophila_2:1629372_a_at:242:53; Interrogation_Position=5438; Antisense; ATGCATATGTACATACCCCTGGGTA
>probe:Drosophila_2:1629372_a_at:345:671; Interrogation_Position=5451; Antisense; TACCCCTGGGTATGCTATGTAAGGC
>probe:Drosophila_2:1629372_a_at:594:57; Interrogation_Position=5467; Antisense; ATGTAAGGCTTTAACGTGTGCGTGT
>probe:Drosophila_2:1629372_a_at:277:517; Interrogation_Position=5482; Antisense; GTGTGCGTGTGTATAGTTTCCTTCA
>probe:Drosophila_2:1629372_a_at:669:489; Interrogation_Position=5536; Antisense; GTAACATTCACCCACTATCGATTAG
>probe:Drosophila_2:1629372_a_at:152:461; Interrogation_Position=5580; Antisense; GATTAAACCAGCATTGTGCGCCGCC
>probe:Drosophila_2:1629372_a_at:521:299; Interrogation_Position=5598; Antisense; CGCCGCCTGTATATTGCTAGTGTTA

Paste this into a BLAST search page for me
GAAGTGTCCTTAGGCGTGTGTTCATATGCGCATCGGTCCAGTATTCAATATGGCTAGCTGACTCGGCCATGTTAAGCCATGTTAATAGATCGATTCCCGACGAAATCCCCTCAAATCGTAGTTCAAATCGTAGTTCATAGTGGGCCCTCTTCGGCTTTGTTGTTATGTTGGCACTATGCATATGTACATACCCCTGGGTATACCCCTGGGTATGCTATGTAAGGCATGTAAGGCTTTAACGTGTGCGTGTGTGTGCGTGTGTATAGTTTCCTTCAGTAACATTCACCCACTATCGATTAGGATTAAACCAGCATTGTGCGCCGCCCGCCGCCTGTATATTGCTAGTGTTA

Full Affymetrix probeset data:

Annotations for 1629372_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720