FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629385_s_at:

>probe:Drosophila_2:1629385_s_at:653:565; Interrogation_Position=3017; Antisense; GGCACCGCAAATATGTATCCCTGAT
>probe:Drosophila_2:1629385_s_at:103:685; Interrogation_Position=3032; Antisense; TATCCCTGATCGATGAGGTCGCCGA
>probe:Drosophila_2:1629385_s_at:22:97; Interrogation_Position=3068; Antisense; AGATAGTCCAGCTGGGTGCTCATGT
>probe:Drosophila_2:1629385_s_at:46:561; Interrogation_Position=3096; Antisense; GGAACGTCCTCCTGATGTTCAGGTA
>probe:Drosophila_2:1629385_s_at:549:713; Interrogation_Position=3113; Antisense; TTCAGGTACTTGAGCAGCGTCTGCT
>probe:Drosophila_2:1629385_s_at:687:157; Interrogation_Position=3149; Antisense; ACACTGAACTTCTTGGCGCGCAGGA
>probe:Drosophila_2:1629385_s_at:114:73; Interrogation_Position=3182; Antisense; AGGAAGGTATCGTCGCATCGCACAT
>probe:Drosophila_2:1629385_s_at:217:151; Interrogation_Position=3203; Antisense; ACATTCTGCAGATCCTCGTTCTTGG
>probe:Drosophila_2:1629385_s_at:691:605; Interrogation_Position=3338; Antisense; TGATCCTGCACCATATTCTGCTTTC
>probe:Drosophila_2:1629385_s_at:203:643; Interrogation_Position=3354; Antisense; TCTGCTTTCCTTCTTCGCTGGAAGA
>probe:Drosophila_2:1629385_s_at:285:97; Interrogation_Position=3376; Antisense; AGATCTGCGATTCGTTGGTTCTGCT
>probe:Drosophila_2:1629385_s_at:553:619; Interrogation_Position=3397; Antisense; TGCTCTGTGGTCACGCGATTGGCAT
>probe:Drosophila_2:1629385_s_at:321:3; Interrogation_Position=3414; Antisense; ATTGGCATGGACTGCGGTCACTACA
>probe:Drosophila_2:1629385_s_at:165:471; Interrogation_Position=3465; Antisense; GTCGGGTTTTTTCTCAAATCCACAT

Paste this into a BLAST search page for me
GGCACCGCAAATATGTATCCCTGATTATCCCTGATCGATGAGGTCGCCGAAGATAGTCCAGCTGGGTGCTCATGTGGAACGTCCTCCTGATGTTCAGGTATTCAGGTACTTGAGCAGCGTCTGCTACACTGAACTTCTTGGCGCGCAGGAAGGAAGGTATCGTCGCATCGCACATACATTCTGCAGATCCTCGTTCTTGGTGATCCTGCACCATATTCTGCTTTCTCTGCTTTCCTTCTTCGCTGGAAGAAGATCTGCGATTCGTTGGTTCTGCTTGCTCTGTGGTCACGCGATTGGCATATTGGCATGGACTGCGGTCACTACAGTCGGGTTTTTTCTCAAATCCACAT

Full Affymetrix probeset data:

Annotations for 1629385_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720