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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629389_a_at:

>probe:Drosophila_2:1629389_a_at:81:19; Interrogation_Position=2127; Antisense; ATTTCGCGGGAGGAGGAGCTCTACA
>probe:Drosophila_2:1629389_a_at:667:89; Interrogation_Position=2159; Antisense; AGTAATCCGCCTGGAGAAGGACCTC
>probe:Drosophila_2:1629389_a_at:173:575; Interrogation_Position=2217; Antisense; GGCGAGGTCATTAACCGGCGAACAC
>probe:Drosophila_2:1629389_a_at:368:305; Interrogation_Position=2257; Antisense; CCGTGGAAGACATGGCTCTGGTGCT
>probe:Drosophila_2:1629389_a_at:288:525; Interrogation_Position=2287; Antisense; GGGCAAGCAAAACCGTCGCCGAGCT
>probe:Drosophila_2:1629389_a_at:18:119; Interrogation_Position=2308; Antisense; AGCTGAAGCTAAAGTTCCCATCCCT
>probe:Drosophila_2:1629389_a_at:628:45; Interrogation_Position=2327; Antisense; ATCCCTGTCGAATGGCTTGCGCTGC
>probe:Drosophila_2:1629389_a_at:445:721; Interrogation_Position=2343; Antisense; TTGCGCTGCATCCTGTCTAACGAGA
>probe:Drosophila_2:1629389_a_at:729:557; Interrogation_Position=2395; Antisense; TCCTCAAAGAAGAGCCCGACCGTTT
>probe:Drosophila_2:1629389_a_at:188:89; Interrogation_Position=2422; Antisense; AGTCGGCGCTACGTCGCTGCAAGAA
>probe:Drosophila_2:1629389_a_at:54:361; Interrogation_Position=2440; Antisense; GCAAGAAGCTGACCGGCACACTGGT
>probe:Drosophila_2:1629389_a_at:217:155; Interrogation_Position=2457; Antisense; ACACTGGTGACGCTCAAACGCTTGG
>probe:Drosophila_2:1629389_a_at:22:625; Interrogation_Position=2503; Antisense; TGCCGCCGAACGAGCCGACTATTAG
>probe:Drosophila_2:1629389_a_at:631:679; Interrogation_Position=2525; Antisense; TAGTGAGGAGACACCACGATCCGCG

Paste this into a BLAST search page for me
ATTTCGCGGGAGGAGGAGCTCTACAAGTAATCCGCCTGGAGAAGGACCTCGGCGAGGTCATTAACCGGCGAACACCCGTGGAAGACATGGCTCTGGTGCTGGGCAAGCAAAACCGTCGCCGAGCTAGCTGAAGCTAAAGTTCCCATCCCTATCCCTGTCGAATGGCTTGCGCTGCTTGCGCTGCATCCTGTCTAACGAGATCCTCAAAGAAGAGCCCGACCGTTTAGTCGGCGCTACGTCGCTGCAAGAAGCAAGAAGCTGACCGGCACACTGGTACACTGGTGACGCTCAAACGCTTGGTGCCGCCGAACGAGCCGACTATTAGTAGTGAGGAGACACCACGATCCGCG

Full Affymetrix probeset data:

Annotations for 1629389_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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