FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629408_s_at:

>probe:Drosophila_2:1629408_s_at:113:585; Interrogation_Position=5133; Antisense; TGGAGTATGTTTCCGAACGCCAGCC
>probe:Drosophila_2:1629408_s_at:697:381; Interrogation_Position=5147; Antisense; GAACGCCAGCCGGAAGTCCAAGGTG
>probe:Drosophila_2:1629408_s_at:308:223; Interrogation_Position=5166; Antisense; AAGGTGCCGGCAAACGCTTGACAAC
>probe:Drosophila_2:1629408_s_at:629:281; Interrogation_Position=5272; Antisense; CTCCTCAGTGGACTACGACGACGTG
>probe:Drosophila_2:1629408_s_at:692:135; Interrogation_Position=5318; Antisense; ACGATAAGGACCACCTTGCTGGAAC
>probe:Drosophila_2:1629408_s_at:526:71; Interrogation_Position=5349; Antisense; AGGAAGAGGAATCAGCCCCTTTCGT
>probe:Drosophila_2:1629408_s_at:342:319; Interrogation_Position=5363; Antisense; GCCCCTTTCGTCTTTACAGTGCGAA
>probe:Drosophila_2:1629408_s_at:590:231; Interrogation_Position=5388; Antisense; AATGACACAATCTTCTCTACTAGGT
>probe:Drosophila_2:1629408_s_at:276:679; Interrogation_Position=5438; Antisense; TAGTGCCAGCTACGCTTAGTTACAA
>probe:Drosophila_2:1629408_s_at:517:555; Interrogation_Position=5495; Antisense; GGACTTTGTGGAAACTCTGCCTTTT
>probe:Drosophila_2:1629408_s_at:307:193; Interrogation_Position=5507; Antisense; AACTCTGCCTTTTGGGTGACACAAT
>probe:Drosophila_2:1629408_s_at:554:209; Interrogation_Position=5562; Antisense; AAGACACTTTGTTTGCAAGTCCTGG
>probe:Drosophila_2:1629408_s_at:156:361; Interrogation_Position=5576; Antisense; GCAAGTCCTGGTTGTAAGTCACAGA
>probe:Drosophila_2:1629408_s_at:568:51; Interrogation_Position=5626; Antisense; ATGCATGTGCATCCTTATATTATAT

Paste this into a BLAST search page for me
TGGAGTATGTTTCCGAACGCCAGCCGAACGCCAGCCGGAAGTCCAAGGTGAAGGTGCCGGCAAACGCTTGACAACCTCCTCAGTGGACTACGACGACGTGACGATAAGGACCACCTTGCTGGAACAGGAAGAGGAATCAGCCCCTTTCGTGCCCCTTTCGTCTTTACAGTGCGAAAATGACACAATCTTCTCTACTAGGTTAGTGCCAGCTACGCTTAGTTACAAGGACTTTGTGGAAACTCTGCCTTTTAACTCTGCCTTTTGGGTGACACAATAAGACACTTTGTTTGCAAGTCCTGGGCAAGTCCTGGTTGTAAGTCACAGAATGCATGTGCATCCTTATATTATAT

Full Affymetrix probeset data:

Annotations for 1629408_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720