FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629418_s_at:

>probe:Drosophila_2:1629418_s_at:378:509; Interrogation_Position=2131; Antisense; GTGCTCACCTCATTGTACTTCATAG
>probe:Drosophila_2:1629418_s_at:485:425; Interrogation_Position=2178; Antisense; GAGAGCCGGCAATATTGTTGTACTT
>probe:Drosophila_2:1629418_s_at:285:197; Interrogation_Position=2260; Antisense; AACGGCGTGGTGAGAGCACTGACAT
>probe:Drosophila_2:1629418_s_at:671:585; Interrogation_Position=2321; Antisense; TGGACGTGCTGGACTCGTATCCGGA
>probe:Drosophila_2:1629418_s_at:233:425; Interrogation_Position=2353; Antisense; GAGAGCTTCGTTAGCAACCTGGTAA
>probe:Drosophila_2:1629418_s_at:337:113; Interrogation_Position=2402; Antisense; AGCACTCTGGCGTCGATATCAAGCA
>probe:Drosophila_2:1629418_s_at:294:207; Interrogation_Position=2422; Antisense; AAGCACCGCTACCTGAGAGCAAAGT
>probe:Drosophila_2:1629418_s_at:132:643; Interrogation_Position=2467; Antisense; TCTCCTGACATACCCTCTATAAGAA
>probe:Drosophila_2:1629418_s_at:570:361; Interrogation_Position=2489; Antisense; GAATAGTCGGGCTGCGTTATAAGAA
>probe:Drosophila_2:1629418_s_at:194:31; Interrogation_Position=2552; Antisense; ATAACTCCCGAGACCTTAATATCTT
>probe:Drosophila_2:1629418_s_at:143:177; Interrogation_Position=2595; Antisense; AAACTATCACCTTGACTTGTTCGAT
>probe:Drosophila_2:1629418_s_at:579:651; Interrogation_Position=2625; Antisense; TAATTAGGGCTCACTTATGCTCGCT
>probe:Drosophila_2:1629418_s_at:412:49; Interrogation_Position=2641; Antisense; ATGCTCGCTCAATCCGAATTATCTT
>probe:Drosophila_2:1629418_s_at:634:509; Interrogation_Position=2674; Antisense; GTGCACAAGCTGTTGCGAGGCTAAA

Paste this into a BLAST search page for me
GTGCTCACCTCATTGTACTTCATAGGAGAGCCGGCAATATTGTTGTACTTAACGGCGTGGTGAGAGCACTGACATTGGACGTGCTGGACTCGTATCCGGAGAGAGCTTCGTTAGCAACCTGGTAAAGCACTCTGGCGTCGATATCAAGCAAAGCACCGCTACCTGAGAGCAAAGTTCTCCTGACATACCCTCTATAAGAAGAATAGTCGGGCTGCGTTATAAGAAATAACTCCCGAGACCTTAATATCTTAAACTATCACCTTGACTTGTTCGATTAATTAGGGCTCACTTATGCTCGCTATGCTCGCTCAATCCGAATTATCTTGTGCACAAGCTGTTGCGAGGCTAAA

Full Affymetrix probeset data:

Annotations for 1629418_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720