FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629424_at:

>probe:Drosophila_2:1629424_at:465:729; Interrogation_Position=101; Antisense; TTGGACACGGCATTGGACTTGCCGC
>probe:Drosophila_2:1629424_at:550:611; Interrogation_Position=14; Antisense; TGAATTTTGGCCCTGTGCAGGAATG
>probe:Drosophila_2:1629424_at:506:619; Interrogation_Position=153; Antisense; TGCTCCTGCATACGCTACGCATCTA
>probe:Drosophila_2:1629424_at:481:343; Interrogation_Position=160; Antisense; GCATACGCTACGCATCTAGCTGGGC
>probe:Drosophila_2:1629424_at:357:135; Interrogation_Position=169; Antisense; ACGCATCTAGCTGGGCCCGTGGTGA
>probe:Drosophila_2:1629424_at:494:157; Interrogation_Position=224; Antisense; ACACATCGGTCTCCGGCCATGGTAT
>probe:Drosophila_2:1629424_at:436:499; Interrogation_Position=232; Antisense; GTCTCCGGCCATGGTATTCACTATG
>probe:Drosophila_2:1629424_at:574:307; Interrogation_Position=240; Antisense; CCATGGTATTCACTATGGCTACTAG
>probe:Drosophila_2:1629424_at:618:507; Interrogation_Position=28; Antisense; GTGCAGGAATGTTGTGCCACCGGTC
>probe:Drosophila_2:1629424_at:35:369; Interrogation_Position=34; Antisense; GAATGTTGTGCCACCGGTCCAGTGG
>probe:Drosophila_2:1629424_at:107:593; Interrogation_Position=69; Antisense; TGGTGGTCAGGCCATCTCAGCTCCC
>probe:Drosophila_2:1629424_at:71:645; Interrogation_Position=83; Antisense; TCTCAGCTCCCGGAATCATTGGACA
>probe:Drosophila_2:1629424_at:377:633; Interrogation_Position=90; Antisense; TCCCGGAATCATTGGACACGGCATT
>probe:Drosophila_2:1629424_at:728:363; Interrogation_Position=95; Antisense; GAATCATTGGACACGGCATTGGACT

Paste this into a BLAST search page for me
TTGGACACGGCATTGGACTTGCCGCTGAATTTTGGCCCTGTGCAGGAATGTGCTCCTGCATACGCTACGCATCTAGCATACGCTACGCATCTAGCTGGGCACGCATCTAGCTGGGCCCGTGGTGAACACATCGGTCTCCGGCCATGGTATGTCTCCGGCCATGGTATTCACTATGCCATGGTATTCACTATGGCTACTAGGTGCAGGAATGTTGTGCCACCGGTCGAATGTTGTGCCACCGGTCCAGTGGTGGTGGTCAGGCCATCTCAGCTCCCTCTCAGCTCCCGGAATCATTGGACATCCCGGAATCATTGGACACGGCATTGAATCATTGGACACGGCATTGGACT

Full Affymetrix probeset data:

Annotations for 1629424_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720