FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629446_at:

>probe:Drosophila_2:1629446_at:622:365; Interrogation_Position=2121; Antisense; GAATCCCGACTCACTCAACGAGGCA
>probe:Drosophila_2:1629446_at:510:301; Interrogation_Position=2183; Antisense; CCCGACTTACGATTAACCTGTACAT
>probe:Drosophila_2:1629446_at:74:491; Interrogation_Position=2202; Antisense; GTACATATAACCACGCTCAAAGCTT
>probe:Drosophila_2:1629446_at:315:339; Interrogation_Position=2216; Antisense; GCTCAAAGCTTTCCTTTCTCAAGGT
>probe:Drosophila_2:1629446_at:191:603; Interrogation_Position=2254; Antisense; TGTTTTTTCTTTACTGCACGCACAC
>probe:Drosophila_2:1629446_at:645:389; Interrogation_Position=2357; Antisense; GAAACACTGTGCAATTAGCGCTTAG
>probe:Drosophila_2:1629446_at:576:537; Interrogation_Position=2397; Antisense; GGTACTCACTGTCGCACACGAAATG
>probe:Drosophila_2:1629446_at:434:13; Interrogation_Position=2452; Antisense; ATTCACGTATTAATCTTGCCATATT
>probe:Drosophila_2:1629446_at:325:601; Interrogation_Position=2504; Antisense; TGTTCATCACTTGGAACTCCCCATT
>probe:Drosophila_2:1629446_at:592:11; Interrogation_Position=2526; Antisense; ATTCTGCCCCTTAGCGTAATTTATA
>probe:Drosophila_2:1629446_at:362:277; Interrogation_Position=2564; Antisense; CTATAGCCGGTTTTTTGGCCAATAG
>probe:Drosophila_2:1629446_at:149:581; Interrogation_Position=2579; Antisense; TGGCCAATAGCTGTTCATTTCCGAG
>probe:Drosophila_2:1629446_at:83:439; Interrogation_Position=2601; Antisense; GAGGAATGAATACCCGTTGCCTAAA
>probe:Drosophila_2:1629446_at:189:181; Interrogation_Position=2624; Antisense; AAAACCTTAGCCATGTATTGCGAAA

Paste this into a BLAST search page for me
GAATCCCGACTCACTCAACGAGGCACCCGACTTACGATTAACCTGTACATGTACATATAACCACGCTCAAAGCTTGCTCAAAGCTTTCCTTTCTCAAGGTTGTTTTTTCTTTACTGCACGCACACGAAACACTGTGCAATTAGCGCTTAGGGTACTCACTGTCGCACACGAAATGATTCACGTATTAATCTTGCCATATTTGTTCATCACTTGGAACTCCCCATTATTCTGCCCCTTAGCGTAATTTATACTATAGCCGGTTTTTTGGCCAATAGTGGCCAATAGCTGTTCATTTCCGAGGAGGAATGAATACCCGTTGCCTAAAAAAACCTTAGCCATGTATTGCGAAA

Full Affymetrix probeset data:

Annotations for 1629446_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720