FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629453_at:

>probe:Drosophila_2:1629453_at:405:221; Interrogation_Position=2660; Antisense; AAGTGTTTTTGTAAGCAACCAGCAA
>probe:Drosophila_2:1629453_at:442:111; Interrogation_Position=2680; Antisense; AGCAAACACAATGGCTCGACCTGAA
>probe:Drosophila_2:1629453_at:314:337; Interrogation_Position=2693; Antisense; GCTCGACCTGAAATAAGTTGCCTGT
>probe:Drosophila_2:1629453_at:4:317; Interrogation_Position=2712; Antisense; GCCTGTTATTAGAGCGCACTTTCTT
>probe:Drosophila_2:1629453_at:249:323; Interrogation_Position=2725; Antisense; GCGCACTTTCTTTTCCAGGTTTAAT
>probe:Drosophila_2:1629453_at:339:479; Interrogation_Position=2755; Antisense; GTATTAGGCTCTATCTAGACCGGCT
>probe:Drosophila_2:1629453_at:139:677; Interrogation_Position=2770; Antisense; TAGACCGGCTTTTAGTTGAAATATT
>probe:Drosophila_2:1629453_at:204:651; Interrogation_Position=2808; Antisense; TACTTGTAAAGGTTTCCCAGCCTGT
>probe:Drosophila_2:1629453_at:64:633; Interrogation_Position=2822; Antisense; TCCCAGCCTGTTGACTAACTACTAA
>probe:Drosophila_2:1629453_at:377:145; Interrogation_Position=2842; Antisense; ACTAACTTTATAACCGATTCGCACA
>probe:Drosophila_2:1629453_at:622:293; Interrogation_Position=2856; Antisense; CGATTCGCACAAGCCTACATATGTA
>probe:Drosophila_2:1629453_at:104:249; Interrogation_Position=2902; Antisense; CAATCTGCATTCCTATTTTTCATGA
>probe:Drosophila_2:1629453_at:574:573; Interrogation_Position=2937; Antisense; GGCGTATTATCTTAGTTCGAACAGC
>probe:Drosophila_2:1629453_at:75:261; Interrogation_Position=2958; Antisense; CAGCGCAATGTGTGTGTTTTTTACA

Paste this into a BLAST search page for me
AAGTGTTTTTGTAAGCAACCAGCAAAGCAAACACAATGGCTCGACCTGAAGCTCGACCTGAAATAAGTTGCCTGTGCCTGTTATTAGAGCGCACTTTCTTGCGCACTTTCTTTTCCAGGTTTAATGTATTAGGCTCTATCTAGACCGGCTTAGACCGGCTTTTAGTTGAAATATTTACTTGTAAAGGTTTCCCAGCCTGTTCCCAGCCTGTTGACTAACTACTAAACTAACTTTATAACCGATTCGCACACGATTCGCACAAGCCTACATATGTACAATCTGCATTCCTATTTTTCATGAGGCGTATTATCTTAGTTCGAACAGCCAGCGCAATGTGTGTGTTTTTTACA

Full Affymetrix probeset data:

Annotations for 1629453_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720