FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629464_a_at:

>probe:Drosophila_2:1629464_a_at:570:121; Interrogation_Position=2723; Antisense; AGCGTTACATCAACTGGGCCTGGGA
>probe:Drosophila_2:1629464_a_at:408:547; Interrogation_Position=2745; Antisense; GGATGAGAGCAATGTCCGCCGCCAG
>probe:Drosophila_2:1629464_a_at:545:145; Interrogation_Position=2771; Antisense; ACTACTTCACCCTGCTTGGATATAT
>probe:Drosophila_2:1629464_a_at:141:251; Interrogation_Position=2802; Antisense; CAATCCGGTGGGTCAGAGTCTTGTG
>probe:Drosophila_2:1629464_a_at:336:643; Interrogation_Position=2820; Antisense; TCTTGTGTGGGATTACGTGCGTGAA
>probe:Drosophila_2:1629464_a_at:118:251; Interrogation_Position=2853; Antisense; GAAGTTGGTGGATCGTTTCGGCATC
>probe:Drosophila_2:1629464_a_at:254:479; Interrogation_Position=2867; Antisense; GTTTCGGCATCAATGAACGCACCTT
>probe:Drosophila_2:1629464_a_at:190:55; Interrogation_Position=2879; Antisense; ATGAACGCACCTTGGGTCGTCTGAT
>probe:Drosophila_2:1629464_a_at:91:351; Interrogation_Position=2955; Antisense; GCAGTTCTTTGCCAAATATCCCGAG
>probe:Drosophila_2:1629464_a_at:528:23; Interrogation_Position=2970; Antisense; ATATCCCGAGGCTGGAGCCGGAACT
>probe:Drosophila_2:1629464_a_at:260:623; Interrogation_Position=2994; Antisense; TGCGGCCCGTCAACAGGCGTTGGAA
>probe:Drosophila_2:1629464_a_at:560:575; Interrogation_Position=3078; Antisense; GGCCAATTACGTTCAACAGTCCAGC
>probe:Drosophila_2:1629464_a_at:184:201; Interrogation_Position=3109; Antisense; AACCGCATTCAGTGAGCCCTAAACT
>probe:Drosophila_2:1629464_a_at:723:661; Interrogation_Position=3128; Antisense; TAAACTCGGCCATTTGCACCTTGTA

Paste this into a BLAST search page for me
AGCGTTACATCAACTGGGCCTGGGAGGATGAGAGCAATGTCCGCCGCCAGACTACTTCACCCTGCTTGGATATATCAATCCGGTGGGTCAGAGTCTTGTGTCTTGTGTGGGATTACGTGCGTGAAGAAGTTGGTGGATCGTTTCGGCATCGTTTCGGCATCAATGAACGCACCTTATGAACGCACCTTGGGTCGTCTGATGCAGTTCTTTGCCAAATATCCCGAGATATCCCGAGGCTGGAGCCGGAACTTGCGGCCCGTCAACAGGCGTTGGAAGGCCAATTACGTTCAACAGTCCAGCAACCGCATTCAGTGAGCCCTAAACTTAAACTCGGCCATTTGCACCTTGTA

Full Affymetrix probeset data:

Annotations for 1629464_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720