FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629469_s_at:

>probe:Drosophila_2:1629469_s_at:125:539; Interrogation_Position=2080; Antisense; GGTCAACTGCAGAAAAGCCGCGATA
>probe:Drosophila_2:1629469_s_at:514:83; Interrogation_Position=2198; Antisense; AGTGTTATTCATTCAACCAACGAAA
>probe:Drosophila_2:1629469_s_at:550:203; Interrogation_Position=2241; Antisense; AAGCCATACTTGCATTTGTTCGGAT
>probe:Drosophila_2:1629469_s_at:635:621; Interrogation_Position=2260; Antisense; TCGGATTTTTAAGGTGTTTGCAAGC
>probe:Drosophila_2:1629469_s_at:128:361; Interrogation_Position=2279; Antisense; GCAAGCATTTCTTCGATAATTCTTA
>probe:Drosophila_2:1629469_s_at:623:483; Interrogation_Position=2349; Antisense; GTATGTGTAGCTGTTTGGGTCTAAA
>probe:Drosophila_2:1629469_s_at:223:377; Interrogation_Position=2380; Antisense; GAAGCATTCAGTCGATTCACTTACC
>probe:Drosophila_2:1629469_s_at:20:461; Interrogation_Position=2393; Antisense; GATTCACTTACCATAGCTCGGTTAA
>probe:Drosophila_2:1629469_s_at:83:291; Interrogation_Position=2410; Antisense; TCGGTTAAGTTGTAAGCCTCGCCAT
>probe:Drosophila_2:1629469_s_at:114:127; Interrogation_Position=2424; Antisense; AGCCTCGCCATTTGCCAATATATTT
>probe:Drosophila_2:1629469_s_at:260:17; Interrogation_Position=2445; Antisense; ATTTATTTACGCCAAGTTAGCGAGA
>probe:Drosophila_2:1629469_s_at:421:653; Interrogation_Position=2549; Antisense; TAATTTTATGATCGCTGAAAGCTAC
>probe:Drosophila_2:1629469_s_at:306:393; Interrogation_Position=2565; Antisense; GAAAGCTACACAGAAATCCCGTCTA
>probe:Drosophila_2:1629469_s_at:469:393; Interrogation_Position=2577; Antisense; GAAATCCCGTCTATCATTGTTAAAC

Paste this into a BLAST search page for me
GGTCAACTGCAGAAAAGCCGCGATAAGTGTTATTCATTCAACCAACGAAAAAGCCATACTTGCATTTGTTCGGATTCGGATTTTTAAGGTGTTTGCAAGCGCAAGCATTTCTTCGATAATTCTTAGTATGTGTAGCTGTTTGGGTCTAAAGAAGCATTCAGTCGATTCACTTACCGATTCACTTACCATAGCTCGGTTAATCGGTTAAGTTGTAAGCCTCGCCATAGCCTCGCCATTTGCCAATATATTTATTTATTTACGCCAAGTTAGCGAGATAATTTTATGATCGCTGAAAGCTACGAAAGCTACACAGAAATCCCGTCTAGAAATCCCGTCTATCATTGTTAAAC

Full Affymetrix probeset data:

Annotations for 1629469_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720