FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629484_s_at:

>probe:Drosophila_2:1629484_s_at:474:249; Interrogation_Position=4033; Antisense; CAATCACAATTCAAGCAGCAGGCAC
>probe:Drosophila_2:1629484_s_at:563:703; Interrogation_Position=4099; Antisense; TTAATGGCAGTATGAAACAGGACAC
>probe:Drosophila_2:1629484_s_at:248:267; Interrogation_Position=4116; Antisense; CAGGACACTCAACCAGAAACCAGAA
>probe:Drosophila_2:1629484_s_at:412:675; Interrogation_Position=4156; Antisense; TAGAATTAAATGCAATCCGGCTGAA
>probe:Drosophila_2:1629484_s_at:342:613; Interrogation_Position=4166; Antisense; TGCAATCCGGCTGAAAAATCGTTTT
>probe:Drosophila_2:1629484_s_at:124:165; Interrogation_Position=4181; Antisense; AAATCGTTTTCAGGGTGCTAATCAA
>probe:Drosophila_2:1629484_s_at:576:589; Interrogation_Position=4275; Antisense; TGGTACCGCCCAAAAAGAGAGAGAG
>probe:Drosophila_2:1629484_s_at:403:425; Interrogation_Position=4293; Antisense; GAGAGAGTAGCCAGCATATAGCAAA
>probe:Drosophila_2:1629484_s_at:2:245; Interrogation_Position=4332; Antisense; AATTTGTTTATTCGTGTGTGTTGAG
>probe:Drosophila_2:1629484_s_at:66:599; Interrogation_Position=4381; Antisense; TGTCGCATATATTTTTGATTTCCTA
>probe:Drosophila_2:1629484_s_at:643:197; Interrogation_Position=4410; Antisense; AACGTCACAGAACTGCAAGTTGCCT
>probe:Drosophila_2:1629484_s_at:388:361; Interrogation_Position=4424; Antisense; GCAAGTTGCCTCAGATCAAAACGAA
>probe:Drosophila_2:1629484_s_at:74:199; Interrogation_Position=4443; Antisense; AACGAAACGACAATGCTAAGCCTAA
>probe:Drosophila_2:1629484_s_at:548:153; Interrogation_Position=4555; Antisense; ACAAAACCGCAACCACAAGTACCTG

Paste this into a BLAST search page for me
CAATCACAATTCAAGCAGCAGGCACTTAATGGCAGTATGAAACAGGACACCAGGACACTCAACCAGAAACCAGAATAGAATTAAATGCAATCCGGCTGAATGCAATCCGGCTGAAAAATCGTTTTAAATCGTTTTCAGGGTGCTAATCAATGGTACCGCCCAAAAAGAGAGAGAGGAGAGAGTAGCCAGCATATAGCAAAAATTTGTTTATTCGTGTGTGTTGAGTGTCGCATATATTTTTGATTTCCTAAACGTCACAGAACTGCAAGTTGCCTGCAAGTTGCCTCAGATCAAAACGAAAACGAAACGACAATGCTAAGCCTAAACAAAACCGCAACCACAAGTACCTG

Full Affymetrix probeset data:

Annotations for 1629484_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720