FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629507_a_at:

>probe:Drosophila_2:1629507_a_at:609:329; Interrogation_Position=4039; Antisense; GCGGCGGCTTTAGAAATGGCGACCA
>probe:Drosophila_2:1629507_a_at:513:661; Interrogation_Position=4138; Antisense; TAAACATTACTATTCGCATTTCGAT
>probe:Drosophila_2:1629507_a_at:556:209; Interrogation_Position=4185; Antisense; AAGACGCATTGAATCTTTTGGTTTT
>probe:Drosophila_2:1629507_a_at:567:671; Interrogation_Position=4221; Antisense; TACGCATGTGCGATCCGAATAGATT
>probe:Drosophila_2:1629507_a_at:424:57; Interrogation_Position=4278; Antisense; ATGATAGTTCCGCTGACATTCCCTA
>probe:Drosophila_2:1629507_a_at:570:1; Interrogation_Position=4295; Antisense; ATTCCCTAACCTGTTGCATACATAC
>probe:Drosophila_2:1629507_a_at:163:329; Interrogation_Position=4327; Antisense; GCTGGAATTTCGTTTGTGAAGGCGT
>probe:Drosophila_2:1629507_a_at:80:227; Interrogation_Position=4345; Antisense; AAGGCGTGGAAATCGTTTATTGTCA
>probe:Drosophila_2:1629507_a_at:497:143; Interrogation_Position=4386; Antisense; ACATTCATTCTATAAAGGCTTTTGG
>probe:Drosophila_2:1629507_a_at:93:73; Interrogation_Position=4401; Antisense; AGGCTTTTGGTGAACCTGTGTAATC
>probe:Drosophila_2:1629507_a_at:93:37; Interrogation_Position=4423; Antisense; ATCATTATTTTTTATCTCTGCTAGC
>probe:Drosophila_2:1629507_a_at:261:281; Interrogation_Position=4438; Antisense; CTCTGCTAGCATTTTAGACGATTAC
>probe:Drosophila_2:1629507_a_at:183:103; Interrogation_Position=4453; Antisense; AGACGATTACTGATTTCGCAATTAG
>probe:Drosophila_2:1629507_a_at:236:283; Interrogation_Position=4462; Antisense; CTGATTTCGCAATTAGACCTTTTTA

Paste this into a BLAST search page for me
GCGGCGGCTTTAGAAATGGCGACCATAAACATTACTATTCGCATTTCGATAAGACGCATTGAATCTTTTGGTTTTTACGCATGTGCGATCCGAATAGATTATGATAGTTCCGCTGACATTCCCTAATTCCCTAACCTGTTGCATACATACGCTGGAATTTCGTTTGTGAAGGCGTAAGGCGTGGAAATCGTTTATTGTCAACATTCATTCTATAAAGGCTTTTGGAGGCTTTTGGTGAACCTGTGTAATCATCATTATTTTTTATCTCTGCTAGCCTCTGCTAGCATTTTAGACGATTACAGACGATTACTGATTTCGCAATTAGCTGATTTCGCAATTAGACCTTTTTA

Full Affymetrix probeset data:

Annotations for 1629507_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720