FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629540_a_at:

>probe:Drosophila_2:1629540_a_at:368:535; Interrogation_Position=2155; Antisense; GGTGCTGCAGCAGGGATCCTATCGC
>probe:Drosophila_2:1629540_a_at:711:403; Interrogation_Position=2186; Antisense; GACTACACCTATTGGCTGGACTGCT
>probe:Drosophila_2:1629540_a_at:368:691; Interrogation_Position=2195; Antisense; TATTGGCTGGACTGCTTCAGTCTGG
>probe:Drosophila_2:1629540_a_at:253:519; Interrogation_Position=2219; Antisense; GTGGTGGTGGCCGTCATCTTTCACA
>probe:Drosophila_2:1629540_a_at:691:37; Interrogation_Position=2234; Antisense; ATCTTTCACATCGTGTCCTTTGGGC
>probe:Drosophila_2:1629540_a_at:9:505; Interrogation_Position=2248; Antisense; GTCCTTTGGGCTGGTTAGGCGATAC
>probe:Drosophila_2:1629540_a_at:97:681; Interrogation_Position=2263; Antisense; TAGGCGATACATTCACCGCAGTGGT
>probe:Drosophila_2:1629540_a_at:296:261; Interrogation_Position=2276; Antisense; CACCGCAGTGGTTACTATTGATTGG
>probe:Drosophila_2:1629540_a_at:403:523; Interrogation_Position=2300; Antisense; GGGCGCTTTTATTATACTAATTTCA
>probe:Drosophila_2:1629540_a_at:169:603; Interrogation_Position=2333; Antisense; TGTTACAGAACTTGCTTCAGCTTAA
>probe:Drosophila_2:1629540_a_at:337:343; Interrogation_Position=2346; Antisense; GCTTCAGCTTAATTTCAGTTGCATT
>probe:Drosophila_2:1629540_a_at:589:93; Interrogation_Position=2362; Antisense; AGTTGCATTGAGTACTCGTGCGGTA
>probe:Drosophila_2:1629540_a_at:130:723; Interrogation_Position=2534; Antisense; TTGCATTTGAACTACATTTGAGCTC
>probe:Drosophila_2:1629540_a_at:455:183; Interrogation_Position=2563; Antisense; AAAAGTCGGGAGTCTTGCGAGTCGA

Paste this into a BLAST search page for me
GGTGCTGCAGCAGGGATCCTATCGCGACTACACCTATTGGCTGGACTGCTTATTGGCTGGACTGCTTCAGTCTGGGTGGTGGTGGCCGTCATCTTTCACAATCTTTCACATCGTGTCCTTTGGGCGTCCTTTGGGCTGGTTAGGCGATACTAGGCGATACATTCACCGCAGTGGTCACCGCAGTGGTTACTATTGATTGGGGGCGCTTTTATTATACTAATTTCATGTTACAGAACTTGCTTCAGCTTAAGCTTCAGCTTAATTTCAGTTGCATTAGTTGCATTGAGTACTCGTGCGGTATTGCATTTGAACTACATTTGAGCTCAAAAGTCGGGAGTCTTGCGAGTCGA

Full Affymetrix probeset data:

Annotations for 1629540_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720