FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629559_s_at:

>probe:Drosophila_2:1629559_s_at:661:1; Interrogation_Position=3598; Antisense; ATACTAGGAGTACCCACGTAGAGCC
>probe:Drosophila_2:1629559_s_at:319:123; Interrogation_Position=3742; Antisense; ACCGAATCGGTGCAGAGTTTAGGAC
>probe:Drosophila_2:1629559_s_at:501:429; Interrogation_Position=3756; Antisense; GAGTTTAGGACACGACTTTCTCCCA
>probe:Drosophila_2:1629559_s_at:197:631; Interrogation_Position=3792; Antisense; TCCGTCCCTAAGTTGTACTCTCAAA
>probe:Drosophila_2:1629559_s_at:176:257; Interrogation_Position=3821; Antisense; CACTATAATCTTCTTTTGGCAATCG
>probe:Drosophila_2:1629559_s_at:463:729; Interrogation_Position=3836; Antisense; TTGGCAATCGATTTCGAGCCCAGAA
>probe:Drosophila_2:1629559_s_at:586:567; Interrogation_Position=3862; Antisense; GGCAGCAGCGTGCAATCAAACGGAA
>probe:Drosophila_2:1629559_s_at:589:105; Interrogation_Position=3920; Antisense; AGAAATCATTCCCTTGTGATAGCAA
>probe:Drosophila_2:1629559_s_at:568:615; Interrogation_Position=3949; Antisense; TGCAGTCCGGGCTGGAGAATCCACA
>probe:Drosophila_2:1629559_s_at:537:421; Interrogation_Position=3963; Antisense; GAGAATCCACATACCGGACGGGAAA
>probe:Drosophila_2:1629559_s_at:30:81; Interrogation_Position=4010; Antisense; AGGGAACCTGGCCAACTGGTGATAT
>probe:Drosophila_2:1629559_s_at:211:41; Interrogation_Position=4066; Antisense; ATCGGATTTGTGTTAGCTGCGCGTA
>probe:Drosophila_2:1629559_s_at:385:475; Interrogation_Position=4077; Antisense; GTTAGCTGCGCGTATTTGTGATTAT
>probe:Drosophila_2:1629559_s_at:75:687; Interrogation_Position=4136; Antisense; TATACGTCTACATTTGTCATGCCAA

Paste this into a BLAST search page for me
ATACTAGGAGTACCCACGTAGAGCCACCGAATCGGTGCAGAGTTTAGGACGAGTTTAGGACACGACTTTCTCCCATCCGTCCCTAAGTTGTACTCTCAAACACTATAATCTTCTTTTGGCAATCGTTGGCAATCGATTTCGAGCCCAGAAGGCAGCAGCGTGCAATCAAACGGAAAGAAATCATTCCCTTGTGATAGCAATGCAGTCCGGGCTGGAGAATCCACAGAGAATCCACATACCGGACGGGAAAAGGGAACCTGGCCAACTGGTGATATATCGGATTTGTGTTAGCTGCGCGTAGTTAGCTGCGCGTATTTGTGATTATTATACGTCTACATTTGTCATGCCAA

Full Affymetrix probeset data:

Annotations for 1629559_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720