FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629617_at:

>probe:Drosophila_2:1629617_at:32:369; Interrogation_Position=1044; Antisense; GAATGATTTTCCACTTACCAAGATG
>probe:Drosophila_2:1629617_at:386:443; Interrogation_Position=1065; Antisense; GATGATATGGTACCCGTTCGTGCAC
>probe:Drosophila_2:1629617_at:282:471; Interrogation_Position=1080; Antisense; GTTCGTGCACAACATCTCAAATCCA
>probe:Drosophila_2:1629617_at:478:649; Interrogation_Position=1096; Antisense; TCAAATCCACGAATTTTCCCCTTAG
>probe:Drosophila_2:1629617_at:260:645; Interrogation_Position=1127; Antisense; TCTTCTATCACACTTTACCAGGCTA
>probe:Drosophila_2:1629617_at:528:679; Interrogation_Position=1156; Antisense; TATGATCTAGCCCTGAGACTCTCGG
>probe:Drosophila_2:1629617_at:250:205; Interrogation_Position=1186; Antisense; AAGCCTCGTCTGGTGAAGCTGTACA
>probe:Drosophila_2:1629617_at:295:483; Interrogation_Position=1214; Antisense; GTATACATGCCAACATTGCGGTACT
>probe:Drosophila_2:1629617_at:553:605; Interrogation_Position=1301; Antisense; TGATGTCTCCGGAGGATCGGCGATT
>probe:Drosophila_2:1629617_at:555:347; Interrogation_Position=1385; Antisense; GCATGCGACTTTACCTGACCAAGGA
>probe:Drosophila_2:1629617_at:586:201; Interrogation_Position=1409; Antisense; AACCTCCAACGCAGGAATCTCTTGA
>probe:Drosophila_2:1629617_at:416:231; Interrogation_Position=1424; Antisense; AATCTCTTGAACAGGGTCGGCGACT
>probe:Drosophila_2:1629617_at:219:705; Interrogation_Position=1452; Antisense; TTATCGCTGGCTTCTTATTGTGGAC
>probe:Drosophila_2:1629617_at:378:363; Interrogation_Position=996; Antisense; GAATCTACTACTCAACACGGACTTC

Paste this into a BLAST search page for me
GAATGATTTTCCACTTACCAAGATGGATGATATGGTACCCGTTCGTGCACGTTCGTGCACAACATCTCAAATCCATCAAATCCACGAATTTTCCCCTTAGTCTTCTATCACACTTTACCAGGCTATATGATCTAGCCCTGAGACTCTCGGAAGCCTCGTCTGGTGAAGCTGTACAGTATACATGCCAACATTGCGGTACTTGATGTCTCCGGAGGATCGGCGATTGCATGCGACTTTACCTGACCAAGGAAACCTCCAACGCAGGAATCTCTTGAAATCTCTTGAACAGGGTCGGCGACTTTATCGCTGGCTTCTTATTGTGGACGAATCTACTACTCAACACGGACTTC

Full Affymetrix probeset data:

Annotations for 1629617_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720