FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629620_s_at:

>probe:Drosophila_2:1629620_s_at:656:691; Interrogation_Position=1218; Antisense; TTTGGCCGCGGCATGGACATCGAGC
>probe:Drosophila_2:1629620_s_at:294:271; Interrogation_Position=1235; Antisense; CATCGAGCGTGTGAACATCGTGTTC
>probe:Drosophila_2:1629620_s_at:726:473; Interrogation_Position=1256; Antisense; GTTCAACTACGACATGCCCGAGGAT
>probe:Drosophila_2:1629620_s_at:527:435; Interrogation_Position=1275; Antisense; GAGGATTCCGACACCTACTTGCATC
>probe:Drosophila_2:1629620_s_at:395:343; Interrogation_Position=1318; Antisense; GCTTCGGCACCAAGGGACTGGCAAT
>probe:Drosophila_2:1629620_s_at:601:405; Interrogation_Position=1333; Antisense; GACTGGCAATCACATTCGTTTCGGA
>probe:Drosophila_2:1629620_s_at:624:293; Interrogation_Position=1358; Antisense; CGAGAACGACGCCAAGATACTTAAC
>probe:Drosophila_2:1629620_s_at:316:595; Interrogation_Position=1403; Antisense; TGTGAACATCAGTGAGCTGCCCGAG
>probe:Drosophila_2:1629620_s_at:606:559; Interrogation_Position=1427; Antisense; GGAAATCGATCTCTCTACATACATT
>probe:Drosophila_2:1629620_s_at:16:667; Interrogation_Position=1442; Antisense; TACATACATTGAGGGACGCTAGAGC
>probe:Drosophila_2:1629620_s_at:249:135; Interrogation_Position=1457; Antisense; ACGCTAGAGCTCGAAGGTGCATGTT
>probe:Drosophila_2:1629620_s_at:316:561; Interrogation_Position=1486; Antisense; GGAACAAGACTATGCACTTCGAATA
>probe:Drosophila_2:1629620_s_at:431:587; Interrogation_Position=1624; Antisense; TGGATTCTAAAACCCACTTGTTTCA
>probe:Drosophila_2:1629620_s_at:355:525; Interrogation_Position=1687; Antisense; GGGCATATTCCCTTAAATAACTTAG

Paste this into a BLAST search page for me
TTTGGCCGCGGCATGGACATCGAGCCATCGAGCGTGTGAACATCGTGTTCGTTCAACTACGACATGCCCGAGGATGAGGATTCCGACACCTACTTGCATCGCTTCGGCACCAAGGGACTGGCAATGACTGGCAATCACATTCGTTTCGGACGAGAACGACGCCAAGATACTTAACTGTGAACATCAGTGAGCTGCCCGAGGGAAATCGATCTCTCTACATACATTTACATACATTGAGGGACGCTAGAGCACGCTAGAGCTCGAAGGTGCATGTTGGAACAAGACTATGCACTTCGAATATGGATTCTAAAACCCACTTGTTTCAGGGCATATTCCCTTAAATAACTTAG

Full Affymetrix probeset data:

Annotations for 1629620_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720