FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629625_at:

>probe:Drosophila_2:1629625_at:622:411; Interrogation_Position=102; Antisense; GACCCTTAAGACAATCTTGCAGTGA
>probe:Drosophila_2:1629625_at:465:37; Interrogation_Position=115; Antisense; ATCTTGCAGTGATCCAACATGGTTG
>probe:Drosophila_2:1629625_at:9:189; Interrogation_Position=130; Antisense; AACATGGTTGACCTCACCGACGCCG
>probe:Drosophila_2:1629625_at:214:403; Interrogation_Position=181; Antisense; GACTTCGCCTTCTACGTGCCGGCAA
>probe:Drosophila_2:1629625_at:180:671; Interrogation_Position=193; Antisense; TACGTGCCGGCAATTGTTGTTTTTA
>probe:Drosophila_2:1629625_at:601:561; Interrogation_Position=201; Antisense; GGCAATTGTTGTTTTTACCCTGGCA
>probe:Drosophila_2:1629625_at:687:3; Interrogation_Position=205; Antisense; ATTGTTGTTTTTACCCTGGCAGCTC
>probe:Drosophila_2:1629625_at:616:707; Interrogation_Position=215; Antisense; TTACCCTGGCAGCTCTCTTTGGCTA
>probe:Drosophila_2:1629625_at:665:631; Interrogation_Position=29; Antisense; TTCGTAATTGTTGAGATAAAGTCGC
>probe:Drosophila_2:1629625_at:180:31; Interrogation_Position=44; Antisense; ATAAAGTCGCAAGCGGAACGCCCGA
>probe:Drosophila_2:1629625_at:55:289; Interrogation_Position=57; Antisense; CGGAACGCCCGAACTGTAGTGCAGA
>probe:Drosophila_2:1629625_at:699:485; Interrogation_Position=72; Antisense; GTAGTGCAGACGCACAAGTGCTCTT
>probe:Drosophila_2:1629625_at:545:409; Interrogation_Position=80; Antisense; GACGCACAAGTGCTCTTCCAAAGAC
>probe:Drosophila_2:1629625_at:601:85; Interrogation_Position=88; Antisense; AGTGCTCTTCCAAAGACCCTTAAGA

Paste this into a BLAST search page for me
GACCCTTAAGACAATCTTGCAGTGAATCTTGCAGTGATCCAACATGGTTGAACATGGTTGACCTCACCGACGCCGGACTTCGCCTTCTACGTGCCGGCAATACGTGCCGGCAATTGTTGTTTTTAGGCAATTGTTGTTTTTACCCTGGCAATTGTTGTTTTTACCCTGGCAGCTCTTACCCTGGCAGCTCTCTTTGGCTATTCGTAATTGTTGAGATAAAGTCGCATAAAGTCGCAAGCGGAACGCCCGACGGAACGCCCGAACTGTAGTGCAGAGTAGTGCAGACGCACAAGTGCTCTTGACGCACAAGTGCTCTTCCAAAGACAGTGCTCTTCCAAAGACCCTTAAGA

Full Affymetrix probeset data:

Annotations for 1629625_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720