FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629648_s_at:

>probe:Drosophila_2:1629648_s_at:318:133; Interrogation_Position=5444; Antisense; ACCCGTGAAGTGTGCCGCATCATTG
>probe:Drosophila_2:1629648_s_at:279:347; Interrogation_Position=5460; Antisense; GCATCATTGCGCACAAGGCGCGCAT
>probe:Drosophila_2:1629648_s_at:323:227; Interrogation_Position=5474; Antisense; AAGGCGCGCATCACAAATCCGCAGG
>probe:Drosophila_2:1629648_s_at:693:235; Interrogation_Position=5489; Antisense; AATCCGCAGGACTATGCGCTCTTTA
>probe:Drosophila_2:1629648_s_at:133:625; Interrogation_Position=5503; Antisense; TGCGCTCTTTAAGCTGGTCGATGGC
>probe:Drosophila_2:1629648_s_at:145:101; Interrogation_Position=5551; Antisense; AGAGTGTCCGCAGGATGCCCGATTG
>probe:Drosophila_2:1629648_s_at:213:561; Interrogation_Position=5585; Antisense; GGAAAGCATTGCATGCTGGCCTACA
>probe:Drosophila_2:1629648_s_at:42:53; Interrogation_Position=5597; Antisense; ATGCTGGCCTACAAGCGGATCGATG
>probe:Drosophila_2:1629648_s_at:449:349; Interrogation_Position=5651; Antisense; GCAGGACACTGAATCATCAGCTCGG
>probe:Drosophila_2:1629648_s_at:368:529; Interrogation_Position=5675; Antisense; GGGATGCACCCGATGCAAATATACG
>probe:Drosophila_2:1629648_s_at:147:617; Interrogation_Position=5688; Antisense; TGCAAATATACGACATACCGCCCCG
>probe:Drosophila_2:1629648_s_at:70:307; Interrogation_Position=5723; Antisense; CCTTCTTGCTCACTAACCAAGCATA
>probe:Drosophila_2:1629648_s_at:92:487; Interrogation_Position=5970; Antisense; GTAGAGTTGCAATTACTGCACAAAG
>probe:Drosophila_2:1629648_s_at:677:615; Interrogation_Position=5986; Antisense; TGCACAAAGAAAGCGATGGAGTCAT

Paste this into a BLAST search page for me
ACCCGTGAAGTGTGCCGCATCATTGGCATCATTGCGCACAAGGCGCGCATAAGGCGCGCATCACAAATCCGCAGGAATCCGCAGGACTATGCGCTCTTTATGCGCTCTTTAAGCTGGTCGATGGCAGAGTGTCCGCAGGATGCCCGATTGGGAAAGCATTGCATGCTGGCCTACAATGCTGGCCTACAAGCGGATCGATGGCAGGACACTGAATCATCAGCTCGGGGGATGCACCCGATGCAAATATACGTGCAAATATACGACATACCGCCCCGCCTTCTTGCTCACTAACCAAGCATAGTAGAGTTGCAATTACTGCACAAAGTGCACAAAGAAAGCGATGGAGTCAT

Full Affymetrix probeset data:

Annotations for 1629648_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720