FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629744_a_at:

>probe:Drosophila_2:1629744_a_at:419:15; Interrogation_Position=2992; Antisense; ATTATGATTTTCCTTGCGCTCACAC
>probe:Drosophila_2:1629744_a_at:619:323; Interrogation_Position=3007; Antisense; GCGCTCACACAAGGCACTTTTTCAA
>probe:Drosophila_2:1629744_a_at:539:565; Interrogation_Position=3019; Antisense; GGCACTTTTTCAACTAAACCAGCTA
>probe:Drosophila_2:1629744_a_at:20:339; Interrogation_Position=3040; Antisense; GCTACGTAACTATCTCTACAAGCAT
>probe:Drosophila_2:1629744_a_at:57:159; Interrogation_Position=3057; Antisense; ACAAGCATTCTATACGCAATTCTCG
>probe:Drosophila_2:1629744_a_at:680:39; Interrogation_Position=3082; Antisense; ATCTGCGACTATATCTCTGTGTGGA
>probe:Drosophila_2:1629744_a_at:366:461; Interrogation_Position=3105; Antisense; GATTTATGGCCACTTGGCGGGCATT
>probe:Drosophila_2:1629744_a_at:342:575; Interrogation_Position=3120; Antisense; GGCGGGCATTTCGTTAGATCTACTC
>probe:Drosophila_2:1629744_a_at:559:97; Interrogation_Position=3135; Antisense; AGATCTACTCTGCTAATTTCCAATT
>probe:Drosophila_2:1629744_a_at:257:247; Interrogation_Position=3156; Antisense; AATTCGAATCTTTGACCACTTTATT
>probe:Drosophila_2:1629744_a_at:233:655; Interrogation_Position=3188; Antisense; TAATTTCTACTGACTTTCCTCGCAA
>probe:Drosophila_2:1629744_a_at:292:431; Interrogation_Position=3313; Antisense; GAGTCTAGCTTACTGTATGTGACGA
>probe:Drosophila_2:1629744_a_at:331:709; Interrogation_Position=3476; Antisense; TTAATTATACGATGGCACGAGCCGA
>probe:Drosophila_2:1629744_a_at:588:565; Interrogation_Position=3489; Antisense; GGCACGAGCCGAGCGAATGGTAATT

Paste this into a BLAST search page for me
ATTATGATTTTCCTTGCGCTCACACGCGCTCACACAAGGCACTTTTTCAAGGCACTTTTTCAACTAAACCAGCTAGCTACGTAACTATCTCTACAAGCATACAAGCATTCTATACGCAATTCTCGATCTGCGACTATATCTCTGTGTGGAGATTTATGGCCACTTGGCGGGCATTGGCGGGCATTTCGTTAGATCTACTCAGATCTACTCTGCTAATTTCCAATTAATTCGAATCTTTGACCACTTTATTTAATTTCTACTGACTTTCCTCGCAAGAGTCTAGCTTACTGTATGTGACGATTAATTATACGATGGCACGAGCCGAGGCACGAGCCGAGCGAATGGTAATT

Full Affymetrix probeset data:

Annotations for 1629744_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720