FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629748_s_at:

>probe:Drosophila_2:1629748_s_at:201:629; Interrogation_Position=5979; Antisense; TCCATGCATTAATCACTTCCGGCAG
>probe:Drosophila_2:1629748_s_at:534:349; Interrogation_Position=6000; Antisense; GCAGTGCCTGCAGTCGGAGAACCTC
>probe:Drosophila_2:1629748_s_at:714:107; Interrogation_Position=6017; Antisense; AGAACCTCTCGGTGAAGCTGCGCTG
>probe:Drosophila_2:1629748_s_at:88:245; Interrogation_Position=6077; Antisense; AATTGAAGACGGCAACACCCTACAT
>probe:Drosophila_2:1629748_s_at:39:137; Interrogation_Position=6104; Antisense; ACGCACTTGCGCCTAGGATAATCGA
>probe:Drosophila_2:1629748_s_at:481:683; Interrogation_Position=6136; Antisense; TATGCGGAGTCCAGCAAGGTGCCCA
>probe:Drosophila_2:1629748_s_at:293:381; Interrogation_Position=6166; Antisense; GAACTGGAGCTACAGGTCACCCTGG
>probe:Drosophila_2:1629748_s_at:440:425; Interrogation_Position=6190; Antisense; GAGAGCATCGTTACCGTGGAGCAGC
>probe:Drosophila_2:1629748_s_at:209:117; Interrogation_Position=6212; Antisense; AGCTTATAGACTTGTCGGAGCCGCA
>probe:Drosophila_2:1629748_s_at:688:553; Interrogation_Position=6228; Antisense; GGAGCCGCAGAACCATATTCAGATG
>probe:Drosophila_2:1629748_s_at:222:99; Interrogation_Position=6248; Antisense; AGATGCTGACTCTGTTGGTCCCTGT
>probe:Drosophila_2:1629748_s_at:318:597; Interrogation_Position=6270; Antisense; TGTGCTCATTGGCTTCCTAGCGGAA
>probe:Drosophila_2:1629748_s_at:547:519; Interrogation_Position=6354; Antisense; GTGGCTACTGAAGATCGGTCCGAAA
>probe:Drosophila_2:1629748_s_at:167:577; Interrogation_Position=6396; Antisense; GGCCCTGATGGGTCAAACACCGGAA

Paste this into a BLAST search page for me
TCCATGCATTAATCACTTCCGGCAGGCAGTGCCTGCAGTCGGAGAACCTCAGAACCTCTCGGTGAAGCTGCGCTGAATTGAAGACGGCAACACCCTACATACGCACTTGCGCCTAGGATAATCGATATGCGGAGTCCAGCAAGGTGCCCAGAACTGGAGCTACAGGTCACCCTGGGAGAGCATCGTTACCGTGGAGCAGCAGCTTATAGACTTGTCGGAGCCGCAGGAGCCGCAGAACCATATTCAGATGAGATGCTGACTCTGTTGGTCCCTGTTGTGCTCATTGGCTTCCTAGCGGAAGTGGCTACTGAAGATCGGTCCGAAAGGCCCTGATGGGTCAAACACCGGAA

Full Affymetrix probeset data:

Annotations for 1629748_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720