FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629754_s_at:

>probe:Drosophila_2:1629754_s_at:70:493; Interrogation_Position=1668; Antisense; GTAACGATACAACCCTAGACTCCAG
>probe:Drosophila_2:1629754_s_at:458:613; Interrogation_Position=1701; Antisense; TGAACACCACGGCAGAGGGCGACAA
>probe:Drosophila_2:1629754_s_at:139:437; Interrogation_Position=1767; Antisense; GAGGACAATCATCTGGTACGACGCC
>probe:Drosophila_2:1629754_s_at:281:539; Interrogation_Position=1781; Antisense; GGTACGACGCCAACGAGAGTGATAT
>probe:Drosophila_2:1629754_s_at:369:513; Interrogation_Position=1799; Antisense; GTGATATCGAATGCACCGCAGGCCG
>probe:Drosophila_2:1629754_s_at:96:315; Interrogation_Position=1835; Antisense; GCCATCCTGGCCCAAGGTGTGCTGC
>probe:Drosophila_2:1629754_s_at:514:351; Interrogation_Position=1900; Antisense; GCAGCACTTGACAGCAACATTAGCG
>probe:Drosophila_2:1629754_s_at:232:291; Interrogation_Position=1923; Antisense; CGGGTGGTGGACAGGCATACATCAA
>probe:Drosophila_2:1629754_s_at:438:29; Interrogation_Position=1939; Antisense; ATACATCAAACATGAGGGCGGCGGC
>probe:Drosophila_2:1629754_s_at:563:525; Interrogation_Position=2011; Antisense; GGGCATGCAGAACGTCATACACATT
>probe:Drosophila_2:1629754_s_at:289:151; Interrogation_Position=2031; Antisense; ACATTGTGGGCGATCAGGTCTTCAT
>probe:Drosophila_2:1629754_s_at:723:647; Interrogation_Position=2044; Antisense; TCAGGTCTTCATACCGCAGCAGCAA
>probe:Drosophila_2:1629754_s_at:478:709; Interrogation_Position=2104; Antisense; TTCAATCATTCCAACGCACCAACGA
>probe:Drosophila_2:1629754_s_at:153:157; Interrogation_Position=2128; Antisense; ACACCATCATCCACATTTCCAAAAA

Paste this into a BLAST search page for me
GTAACGATACAACCCTAGACTCCAGTGAACACCACGGCAGAGGGCGACAAGAGGACAATCATCTGGTACGACGCCGGTACGACGCCAACGAGAGTGATATGTGATATCGAATGCACCGCAGGCCGGCCATCCTGGCCCAAGGTGTGCTGCGCAGCACTTGACAGCAACATTAGCGCGGGTGGTGGACAGGCATACATCAAATACATCAAACATGAGGGCGGCGGCGGGCATGCAGAACGTCATACACATTACATTGTGGGCGATCAGGTCTTCATTCAGGTCTTCATACCGCAGCAGCAATTCAATCATTCCAACGCACCAACGAACACCATCATCCACATTTCCAAAAA

Full Affymetrix probeset data:

Annotations for 1629754_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720