FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629771_at:

>probe:Drosophila_2:1629771_at:397:725; Interrogation_Position=1438; Antisense; TTGTAATTGGAAATGCCCGCGGACT
>probe:Drosophila_2:1629771_at:537:301; Interrogation_Position=1454; Antisense; CCGCGGACTGACTAGGGATTCTGTA
>probe:Drosophila_2:1629771_at:562:471; Interrogation_Position=1486; Antisense; GTTATCGGGTACCAGCTGGCACGAT
>probe:Drosophila_2:1629771_at:384:259; Interrogation_Position=1505; Antisense; CACGATTGTGTCCATGATTCCCATA
>probe:Drosophila_2:1629771_at:258:717; Interrogation_Position=1522; Antisense; TTCCCATAAATTCCCTGTACAGCGA
>probe:Drosophila_2:1629771_at:664:121; Interrogation_Position=1542; Antisense; AGCGAGGAGTACTTCCCAAAGCCCA
>probe:Drosophila_2:1629771_at:557:173; Interrogation_Position=1559; Antisense; AAAGCCCACGGAGTTCCTGCCGGAG
>probe:Drosophila_2:1629771_at:28:721; Interrogation_Position=1572; Antisense; TTCCTGCCGGAGAGATGGCTGCGAA
>probe:Drosophila_2:1629771_at:457:391; Interrogation_Position=1594; Antisense; GAAACGCCAGCGATTCTGCCGGAAA
>probe:Drosophila_2:1629771_at:210:711; Interrogation_Position=1772; Antisense; TTCCACAAAGAACGCTTTTCGCTCC
>probe:Drosophila_2:1629771_at:411:281; Interrogation_Position=1809; Antisense; CTGCCCAATATACCACTCAAGTTTA
>probe:Drosophila_2:1629771_at:500:477; Interrogation_Position=1829; Antisense; GTTTAAGTTTACAGATGTGCCCAAC
>probe:Drosophila_2:1629771_at:711:441; Interrogation_Position=1842; Antisense; GATGTGCCCAACTAATACGTTTTAC
>probe:Drosophila_2:1629771_at:106:479; Interrogation_Position=1952; Antisense; GTTTATAAGTCCCTCTGTTTGCAAA

Paste this into a BLAST search page for me
TTGTAATTGGAAATGCCCGCGGACTCCGCGGACTGACTAGGGATTCTGTAGTTATCGGGTACCAGCTGGCACGATCACGATTGTGTCCATGATTCCCATATTCCCATAAATTCCCTGTACAGCGAAGCGAGGAGTACTTCCCAAAGCCCAAAAGCCCACGGAGTTCCTGCCGGAGTTCCTGCCGGAGAGATGGCTGCGAAGAAACGCCAGCGATTCTGCCGGAAATTCCACAAAGAACGCTTTTCGCTCCCTGCCCAATATACCACTCAAGTTTAGTTTAAGTTTACAGATGTGCCCAACGATGTGCCCAACTAATACGTTTTACGTTTATAAGTCCCTCTGTTTGCAAA

Full Affymetrix probeset data:

Annotations for 1629771_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720