FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629784_a_at:

>probe:Drosophila_2:1629784_a_at:425:677; Interrogation_Position=3020; Antisense; TAGACACTCGTAGCTATGGCTAATA
>probe:Drosophila_2:1629784_a_at:611:561; Interrogation_Position=3056; Antisense; GGAACTGGACAGTATTCACTCTTAA
>probe:Drosophila_2:1629784_a_at:258:73; Interrogation_Position=3109; Antisense; AGGACTTAGAAAGCGCTCTTACCCA
>probe:Drosophila_2:1629784_a_at:550:643; Interrogation_Position=3125; Antisense; TCTTACCCAACAATTATCCACGCAA
>probe:Drosophila_2:1629784_a_at:550:19; Interrogation_Position=3224; Antisense; ATTTGCTTCTTGAAAATTGCGCTTT
>probe:Drosophila_2:1629784_a_at:485:5; Interrogation_Position=3239; Antisense; ATTGCGCTTTAATTGGGATTCCTTA
>probe:Drosophila_2:1629784_a_at:70:315; Interrogation_Position=3300; Antisense; GCCATAGCTCTACTGACCAAACGAA
>probe:Drosophila_2:1629784_a_at:291:65; Interrogation_Position=3338; Antisense; ATGGTACCAACATACTGATCAGCGC
>probe:Drosophila_2:1629784_a_at:342:605; Interrogation_Position=3353; Antisense; TGATCAGCGCACTTCCAGAGTTTTG
>probe:Drosophila_2:1629784_a_at:52:629; Interrogation_Position=3366; Antisense; TCCAGAGTTTTGTCCAGTCCAACGA
>probe:Drosophila_2:1629784_a_at:253:199; Interrogation_Position=3386; Antisense; AACGACATAGTTTAGCTTGGCTTCA
>probe:Drosophila_2:1629784_a_at:723:7; Interrogation_Position=3416; Antisense; ATTCGATCCCGTTGATTTTGGGCCA
>probe:Drosophila_2:1629784_a_at:518:85; Interrogation_Position=3480; Antisense; AGTGCAGTAAATGTCGGCTTGTATA
>probe:Drosophila_2:1629784_a_at:685:727; Interrogation_Position=3519; Antisense; TTGGCTTGTGATTGCGTTTTGTTAC

Paste this into a BLAST search page for me
TAGACACTCGTAGCTATGGCTAATAGGAACTGGACAGTATTCACTCTTAAAGGACTTAGAAAGCGCTCTTACCCATCTTACCCAACAATTATCCACGCAAATTTGCTTCTTGAAAATTGCGCTTTATTGCGCTTTAATTGGGATTCCTTAGCCATAGCTCTACTGACCAAACGAAATGGTACCAACATACTGATCAGCGCTGATCAGCGCACTTCCAGAGTTTTGTCCAGAGTTTTGTCCAGTCCAACGAAACGACATAGTTTAGCTTGGCTTCAATTCGATCCCGTTGATTTTGGGCCAAGTGCAGTAAATGTCGGCTTGTATATTGGCTTGTGATTGCGTTTTGTTAC

Full Affymetrix probeset data:

Annotations for 1629784_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720