FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629834_at:

>probe:Drosophila_2:1629834_at:347:269; Interrogation_Position=127; Antisense; CATGGTTGGCGATGACCATCACCAC
>probe:Drosophila_2:1629834_at:384:311; Interrogation_Position=13; Antisense; GCCATCTGTACAACAAACCAGCTTT
>probe:Drosophila_2:1629834_at:661:297; Interrogation_Position=164; Antisense; CGCAGCGTTCACTTCGCCGAGGACG
>probe:Drosophila_2:1629834_at:444:317; Interrogation_Position=179; Antisense; GCCGAGGACGTTCAGGCTCAGCACA
>probe:Drosophila_2:1629834_at:395:571; Interrogation_Position=193; Antisense; GGCTCAGCACAAGCACGATGACGTC
>probe:Drosophila_2:1629834_at:439:443; Interrogation_Position=209; Antisense; GATGACGTCGCCTGCTGCGGCTAGA
>probe:Drosophila_2:1629834_at:218:623; Interrogation_Position=224; Antisense; TGCGGCTAGACATCTCCATTTGGAG
>probe:Drosophila_2:1629834_at:677:629; Interrogation_Position=238; Antisense; TCCATTTGGAGCAAGGCGTGACGGC
>probe:Drosophila_2:1629834_at:415:227; Interrogation_Position=250; Antisense; AAGGCGTGACGGCAACTTCATCGAT
>probe:Drosophila_2:1629834_at:572:407; Interrogation_Position=257; Antisense; GACGGCAACTTCATCGATCTTAAAC
>probe:Drosophila_2:1629834_at:579:645; Interrogation_Position=267; Antisense; TCATCGATCTTAAACCGCCTTTAAC
>probe:Drosophila_2:1629834_at:234:203; Interrogation_Position=28; Antisense; AACCAGCTTTACCATGAAGTTCCTA
>probe:Drosophila_2:1629834_at:609:53; Interrogation_Position=41; Antisense; ATGAAGTTCCTACTCGTGTGCACTC
>probe:Drosophila_2:1629834_at:87:669; Interrogation_Position=51; Antisense; TACTCGTGTGCACTCTCATCCTGGG

Paste this into a BLAST search page for me
CATGGTTGGCGATGACCATCACCACGCCATCTGTACAACAAACCAGCTTTCGCAGCGTTCACTTCGCCGAGGACGGCCGAGGACGTTCAGGCTCAGCACAGGCTCAGCACAAGCACGATGACGTCGATGACGTCGCCTGCTGCGGCTAGATGCGGCTAGACATCTCCATTTGGAGTCCATTTGGAGCAAGGCGTGACGGCAAGGCGTGACGGCAACTTCATCGATGACGGCAACTTCATCGATCTTAAACTCATCGATCTTAAACCGCCTTTAACAACCAGCTTTACCATGAAGTTCCTAATGAAGTTCCTACTCGTGTGCACTCTACTCGTGTGCACTCTCATCCTGGG

Full Affymetrix probeset data:

Annotations for 1629834_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720