FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629859_s_at:

>probe:Drosophila_2:1629859_s_at:41:133; Interrogation_Position=1919; Antisense; ACCGATGGCAGCAACACGATCTTTG
>probe:Drosophila_2:1629859_s_at:129:157; Interrogation_Position=1932; Antisense; ACACGATCTTTGGTCATGGTCGCCA
>probe:Drosophila_2:1629859_s_at:508:591; Interrogation_Position=1948; Antisense; TGGTCGCCAAGTGTCTGCAGAATCT
>probe:Drosophila_2:1629859_s_at:276:309; Interrogation_Position=1975; Antisense; CCAACTTGATTGAATTCGGCGGCAA
>probe:Drosophila_2:1629859_s_at:696:435; Interrogation_Position=2013; Antisense; GAGGTTGTCAATCCGTTTATCTTGA
>probe:Drosophila_2:1629859_s_at:504:543; Interrogation_Position=2066; Antisense; GGATCAACTGTCCTCGGTGAACGAT
>probe:Drosophila_2:1629859_s_at:486:533; Interrogation_Position=2081; Antisense; GGTGAACGATCCGAACCAACCGCTT
>probe:Drosophila_2:1629859_s_at:363:309; Interrogation_Position=2096; Antisense; CCAACCGCTTGGAATGTTTGTCGAA
>probe:Drosophila_2:1629859_s_at:401:161; Interrogation_Position=2141; Antisense; ACAAGACACTGGACGCGAGCTGGCT
>probe:Drosophila_2:1629859_s_at:184:723; Interrogation_Position=2169; Antisense; TTGCATCACATCTGCGTATCTCATT
>probe:Drosophila_2:1629859_s_at:75:361; Interrogation_Position=2195; Antisense; GCAAGAACTGCACGAGCTATCCAAC
>probe:Drosophila_2:1629859_s_at:533:609; Interrogation_Position=2248; Antisense; TGACGGACATGCTGACCAAACACAA
>probe:Drosophila_2:1629859_s_at:267:173; Interrogation_Position=2332; Antisense; AAAGCGATGTCTTCTTATCTACAAG
>probe:Drosophila_2:1629859_s_at:584:701; Interrogation_Position=2346; Antisense; TTATCTACAAGTCCCTTCATACCTT

Paste this into a BLAST search page for me
ACCGATGGCAGCAACACGATCTTTGACACGATCTTTGGTCATGGTCGCCATGGTCGCCAAGTGTCTGCAGAATCTCCAACTTGATTGAATTCGGCGGCAAGAGGTTGTCAATCCGTTTATCTTGAGGATCAACTGTCCTCGGTGAACGATGGTGAACGATCCGAACCAACCGCTTCCAACCGCTTGGAATGTTTGTCGAAACAAGACACTGGACGCGAGCTGGCTTTGCATCACATCTGCGTATCTCATTGCAAGAACTGCACGAGCTATCCAACTGACGGACATGCTGACCAAACACAAAAAGCGATGTCTTCTTATCTACAAGTTATCTACAAGTCCCTTCATACCTT

Full Affymetrix probeset data:

Annotations for 1629859_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720