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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629868_s_at:

>probe:Drosophila_2:1629868_s_at:226:391; Interrogation_Position=1679; Antisense; GAAAGTCACTAATCCTTAACTAGGG
>probe:Drosophila_2:1629868_s_at:550:227; Interrogation_Position=1748; Antisense; AATGGGTACTAATTCGAATCTGAGC
>probe:Drosophila_2:1629868_s_at:472:367; Interrogation_Position=1763; Antisense; GAATCTGAGCTACTTCAGTCCGCTC
>probe:Drosophila_2:1629868_s_at:456:87; Interrogation_Position=1779; Antisense; AGTCCGCTCACTGTTAATGTGTTGT
>probe:Drosophila_2:1629868_s_at:568:57; Interrogation_Position=1818; Antisense; ATGGGTATGTTTTCAAAGGCCTTCA
>probe:Drosophila_2:1629868_s_at:441:225; Interrogation_Position=1833; Antisense; AAGGCCTTCAATTCTTTCAAGTCCG
>probe:Drosophila_2:1629868_s_at:717:361; Interrogation_Position=1859; Antisense; GAATTGTTTCGATTTTGACCAACCA
>probe:Drosophila_2:1629868_s_at:648:369; Interrogation_Position=1888; Antisense; GAATGGTCCATTTACAAAGAGCTGC
>probe:Drosophila_2:1629868_s_at:247:57; Interrogation_Position=2012; Antisense; ATGAGGTCTCCTTATAAGCCATTTA
>probe:Drosophila_2:1629868_s_at:121:205; Interrogation_Position=2027; Antisense; AAGCCATTTAGTTCTGACGTAGCAG
>probe:Drosophila_2:1629868_s_at:368:169; Interrogation_Position=2088; Antisense; AAATGGCTGCTTCGAAAATATGTTA
>probe:Drosophila_2:1629868_s_at:113:75; Interrogation_Position=2118; Antisense; AGGACACTGTATATACGCTGCTATT
>probe:Drosophila_2:1629868_s_at:282:133; Interrogation_Position=2132; Antisense; ACGCTGCTATTGAAACCTAAACTAT
>probe:Drosophila_2:1629868_s_at:483:451; Interrogation_Position=2213; Antisense; GATCGATATCAAACTGCTGTGTGTA

Paste this into a BLAST search page for me
GAAAGTCACTAATCCTTAACTAGGGAATGGGTACTAATTCGAATCTGAGCGAATCTGAGCTACTTCAGTCCGCTCAGTCCGCTCACTGTTAATGTGTTGTATGGGTATGTTTTCAAAGGCCTTCAAAGGCCTTCAATTCTTTCAAGTCCGGAATTGTTTCGATTTTGACCAACCAGAATGGTCCATTTACAAAGAGCTGCATGAGGTCTCCTTATAAGCCATTTAAAGCCATTTAGTTCTGACGTAGCAGAAATGGCTGCTTCGAAAATATGTTAAGGACACTGTATATACGCTGCTATTACGCTGCTATTGAAACCTAAACTATGATCGATATCAAACTGCTGTGTGTA

Full Affymetrix probeset data:

Annotations for 1629868_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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