FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629869_s_at:

>probe:Drosophila_2:1629869_s_at:339:553; Interrogation_Position=2175; Antisense; GGACCTGACTGGAACCTTTAAGCTG
>probe:Drosophila_2:1629869_s_at:696:709; Interrogation_Position=2192; Antisense; TTAAGCTGCGCAAGGTAGACCTGCA
>probe:Drosophila_2:1629869_s_at:530:71; Interrogation_Position=2219; Antisense; AGGAGGGCTACGATCCGAACGCGAT
>probe:Drosophila_2:1629869_s_at:506:33; Interrogation_Position=2242; Antisense; ATCAAGGACGCGCTGTACTACCAGA
>probe:Drosophila_2:1629869_s_at:689:665; Interrogation_Position=2257; Antisense; TACTACCAGACTTCCAAGGGTCGGT
>probe:Drosophila_2:1629869_s_at:484:137; Interrogation_Position=2306; Antisense; ACGACCAGGTGCAGCGCAACGAAAT
>probe:Drosophila_2:1629869_s_at:457:395; Interrogation_Position=2326; Antisense; GAAATCCGCTTCTAAGAGCTGCAAT
>probe:Drosophila_2:1629869_s_at:369:677; Interrogation_Position=2350; Antisense; TAGAGTTGTGTCTGAACCTTGCCTT
>probe:Drosophila_2:1629869_s_at:237:721; Interrogation_Position=2368; Antisense; TTGCCTTTTGCCCAATATGCTGTTA
>probe:Drosophila_2:1629869_s_at:559:351; Interrogation_Position=2440; Antisense; GCAGCAAAGATCATTCAGCCTAGGA
>probe:Drosophila_2:1629869_s_at:100:445; Interrogation_Position=2467; Antisense; GATGCATCCGAAGCACATTTCCATG
>probe:Drosophila_2:1629869_s_at:575:27; Interrogation_Position=2572; Antisense; ATAGCCTCCTATACGCATTTCAATT
>probe:Drosophila_2:1629869_s_at:638:17; Interrogation_Position=2663; Antisense; ATTTACACTTCCATTCTCGTTGCGT
>probe:Drosophila_2:1629869_s_at:278:623; Interrogation_Position=2683; Antisense; TGCGTTTCGTTTTTGCCTGTACATA

Paste this into a BLAST search page for me
GGACCTGACTGGAACCTTTAAGCTGTTAAGCTGCGCAAGGTAGACCTGCAAGGAGGGCTACGATCCGAACGCGATATCAAGGACGCGCTGTACTACCAGATACTACCAGACTTCCAAGGGTCGGTACGACCAGGTGCAGCGCAACGAAATGAAATCCGCTTCTAAGAGCTGCAATTAGAGTTGTGTCTGAACCTTGCCTTTTGCCTTTTGCCCAATATGCTGTTAGCAGCAAAGATCATTCAGCCTAGGAGATGCATCCGAAGCACATTTCCATGATAGCCTCCTATACGCATTTCAATTATTTACACTTCCATTCTCGTTGCGTTGCGTTTCGTTTTTGCCTGTACATA

Full Affymetrix probeset data:

Annotations for 1629869_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720