FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629897_a_at:

>probe:Drosophila_2:1629897_a_at:314:597; Interrogation_Position=1002; Antisense; TGTGCACCGCAACAGATGAGCTTGA
>probe:Drosophila_2:1629897_a_at:323:529; Interrogation_Position=1031; Antisense; GGGATGTAGCCCTCGGATAACGTCG
>probe:Drosophila_2:1629897_a_at:708:541; Interrogation_Position=1045; Antisense; GGATAACGTCGATGGCCTGGCAAAT
>probe:Drosophila_2:1629897_a_at:517:719; Interrogation_Position=1070; Antisense; TTGCGATAGTTGTTTGCTTTGTTAC
>probe:Drosophila_2:1629897_a_at:686:115; Interrogation_Position=1126; Antisense; AGCGAACTTCCCAGAGCTATAGGTT
>probe:Drosophila_2:1629897_a_at:61:663; Interrogation_Position=1154; Antisense; TAAATTTTACACTTCCAACTCAGCT
>probe:Drosophila_2:1629897_a_at:508:275; Interrogation_Position=1177; Antisense; CTTCCTCTACTTCCAATATCGATGT
>probe:Drosophila_2:1629897_a_at:161:465; Interrogation_Position=1287; Antisense; GATTGCTTTAGTATTGCGCTTAGTC
>probe:Drosophila_2:1629897_a_at:615:377; Interrogation_Position=1357; Antisense; GATACCAAGTGGCTTACCGAATCAT
>probe:Drosophila_2:1629897_a_at:533:335; Interrogation_Position=905; Antisense; GCTCCAGTTGGCAGTGACCTTTCGG
>probe:Drosophila_2:1629897_a_at:195:609; Interrogation_Position=919; Antisense; TGACCTTTCGGTTCTGAAGCAGTTT
>probe:Drosophila_2:1629897_a_at:156:481; Interrogation_Position=940; Antisense; GTTTGAGTTCAAGACCGCTCCATAA
>probe:Drosophila_2:1629897_a_at:644:615; Interrogation_Position=968; Antisense; TGCACCACCGGCATTACGTGATTAC
>probe:Drosophila_2:1629897_a_at:584:705; Interrogation_Position=989; Antisense; TTACGTTTGGAGATGTGCACCGCAA

Paste this into a BLAST search page for me
TGTGCACCGCAACAGATGAGCTTGAGGGATGTAGCCCTCGGATAACGTCGGGATAACGTCGATGGCCTGGCAAATTTGCGATAGTTGTTTGCTTTGTTACAGCGAACTTCCCAGAGCTATAGGTTTAAATTTTACACTTCCAACTCAGCTCTTCCTCTACTTCCAATATCGATGTGATTGCTTTAGTATTGCGCTTAGTCGATACCAAGTGGCTTACCGAATCATGCTCCAGTTGGCAGTGACCTTTCGGTGACCTTTCGGTTCTGAAGCAGTTTGTTTGAGTTCAAGACCGCTCCATAATGCACCACCGGCATTACGTGATTACTTACGTTTGGAGATGTGCACCGCAA

Full Affymetrix probeset data:

Annotations for 1629897_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720