FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629898_s_at:

>probe:Drosophila_2:1629898_s_at:199:349; Interrogation_Position=2465; Antisense; GCATGGGCATTGGTCACTCCATCAC
>probe:Drosophila_2:1629898_s_at:16:649; Interrogation_Position=2497; Antisense; TCACGTCGCTCCTCAATTTCAGAAT
>probe:Drosophila_2:1629898_s_at:168:245; Interrogation_Position=2511; Antisense; AATTTCAGAATCCTCGGCCATCTCA
>probe:Drosophila_2:1629898_s_at:121:269; Interrogation_Position=2534; Antisense; CAGGCTTTTCCTCGGCTAGCAATAA
>probe:Drosophila_2:1629898_s_at:277:29; Interrogation_Position=2555; Antisense; ATAAAACCTACGTGCACGAGGCCTC
>probe:Drosophila_2:1629898_s_at:524:133; Interrogation_Position=2581; Antisense; ACCCTGGTGCTGGAGACCATCGAGA
>probe:Drosophila_2:1629898_s_at:394:31; Interrogation_Position=2611; Antisense; ATAAAGCGCCACTTCATTGTGCCTT
>probe:Drosophila_2:1629898_s_at:206:83; Interrogation_Position=2669; Antisense; AGGGCACCAAGCTGCACATCTACAA
>probe:Drosophila_2:1629898_s_at:252:273; Interrogation_Position=2716; Antisense; CATTTGAGCGGAAGCGGTCTGCAGT
>probe:Drosophila_2:1629898_s_at:535:497; Interrogation_Position=2732; Antisense; GTCTGCAGTGCTCCATCTGTATGAA
>probe:Drosophila_2:1629898_s_at:266:41; Interrogation_Position=2746; Antisense; ATCTGTATGAAGTCCATCCCGCGGA
>probe:Drosophila_2:1629898_s_at:708:207; Interrogation_Position=2779; Antisense; AAGCAGGGCTACGAGTGTCGCGACT
>probe:Drosophila_2:1629898_s_at:359:503; Interrogation_Position=2795; Antisense; GTCGCGACTGCCAGCTGATTAGTCA
>probe:Drosophila_2:1629898_s_at:648:461; Interrogation_Position=2811; Antisense; GATTAGTCACAAGCAGTGCCACATA

Paste this into a BLAST search page for me
GCATGGGCATTGGTCACTCCATCACTCACGTCGCTCCTCAATTTCAGAATAATTTCAGAATCCTCGGCCATCTCACAGGCTTTTCCTCGGCTAGCAATAAATAAAACCTACGTGCACGAGGCCTCACCCTGGTGCTGGAGACCATCGAGAATAAAGCGCCACTTCATTGTGCCTTAGGGCACCAAGCTGCACATCTACAACATTTGAGCGGAAGCGGTCTGCAGTGTCTGCAGTGCTCCATCTGTATGAAATCTGTATGAAGTCCATCCCGCGGAAAGCAGGGCTACGAGTGTCGCGACTGTCGCGACTGCCAGCTGATTAGTCAGATTAGTCACAAGCAGTGCCACATA

Full Affymetrix probeset data:

Annotations for 1629898_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720