FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629939_a_at:

>probe:Drosophila_2:1629939_a_at:242:85; Interrogation_Position=1397; Antisense; AGTGTTACCGTGGTGCCCGGAGCCT
>probe:Drosophila_2:1629939_a_at:312:645; Interrogation_Position=1421; Antisense; TCATACTTTGGCTCCGATGACAGCT
>probe:Drosophila_2:1629939_a_at:115:445; Interrogation_Position=1436; Antisense; GATGACAGCTTTGCCATGATCCGTG
>probe:Drosophila_2:1629939_a_at:653:543; Interrogation_Position=1471; Antisense; GGATATCACCATTTTGGGCGCCATG
>probe:Drosophila_2:1629939_a_at:368:287; Interrogation_Position=1525; Antisense; CTGGATGATTCCTGGCAAACTGGTT
>probe:Drosophila_2:1629939_a_at:317:451; Interrogation_Position=1684; Antisense; GATCGACATGATCATCTCGGAGAAG
>probe:Drosophila_2:1629939_a_at:643:643; Interrogation_Position=1698; Antisense; TCTCGGAGAAGGCTGTCTTCACGGT
>probe:Drosophila_2:1629939_a_at:250:1; Interrogation_Position=1757; Antisense; GCCGAGGGTTACACCGTGGACGACA
>probe:Drosophila_2:1629939_a_at:114:521; Interrogation_Position=1772; Antisense; GTGGACGACATCATTGCCAGCACTG
>probe:Drosophila_2:1629939_a_at:458:313; Interrogation_Position=1787; Antisense; GCCAGCACTGGAGCCAAGTTCACAG
>probe:Drosophila_2:1629939_a_at:219:217; Interrogation_Position=1802; Antisense; AAGTTCACAGTGTCGCCCAATCTGA
>probe:Drosophila_2:1629939_a_at:205:495; Interrogation_Position=1836; Antisense; GTCAAATTCCGGTCTGATGAGCCAC
>probe:Drosophila_2:1629939_a_at:37:607; Interrogation_Position=1850; Antisense; TGATGAGCCACGTGCTTAGTGCCCA
>probe:Drosophila_2:1629939_a_at:274:109; Interrogation_Position=1876; Antisense; AGAAGCTGCAATACCTCCGGTTGAG

Paste this into a BLAST search page for me
AGTGTTACCGTGGTGCCCGGAGCCTTCATACTTTGGCTCCGATGACAGCTGATGACAGCTTTGCCATGATCCGTGGGATATCACCATTTTGGGCGCCATGCTGGATGATTCCTGGCAAACTGGTTGATCGACATGATCATCTCGGAGAAGTCTCGGAGAAGGCTGTCTTCACGGTGCCGAGGGTTACACCGTGGACGACAGTGGACGACATCATTGCCAGCACTGGCCAGCACTGGAGCCAAGTTCACAGAAGTTCACAGTGTCGCCCAATCTGAGTCAAATTCCGGTCTGATGAGCCACTGATGAGCCACGTGCTTAGTGCCCAAGAAGCTGCAATACCTCCGGTTGAG

Full Affymetrix probeset data:

Annotations for 1629939_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720