FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629991_a_at:

>probe:Drosophila_2:1629991_a_at:318:467; Interrogation_Position=2855; Antisense; GTTGATGCAGCCGTAAAGCCCACAA
>probe:Drosophila_2:1629991_a_at:256:563; Interrogation_Position=2910; Antisense; GGAATCCATACTATACCCAGCTGGC
>probe:Drosophila_2:1629991_a_at:324:261; Interrogation_Position=2927; Antisense; CAGCTGGCGGATCCACTGAATTTGG
>probe:Drosophila_2:1629991_a_at:506:543; Interrogation_Position=2977; Antisense; GGATAATCCTTTGCGCTGCTACGTT
>probe:Drosophila_2:1629991_a_at:62:97; Interrogation_Position=3031; Antisense; AGATCTTGGAGGTGAACGCGTCGTC
>probe:Drosophila_2:1629991_a_at:456:691; Interrogation_Position=3071; Antisense; TTTCCTCTGGAAGCTCCTGTGGGAG
>probe:Drosophila_2:1629991_a_at:365:415; Interrogation_Position=3093; Antisense; GAGCCATTGGGCGTTCTATTGTGAT
>probe:Drosophila_2:1629991_a_at:509:459; Interrogation_Position=3115; Antisense; GATTTTTGGACCAGATCACTCCCAT
>probe:Drosophila_2:1629991_a_at:250:57; Interrogation_Position=3138; Antisense; ATGAGCGTGCCCAGTTTCTGGATGA
>probe:Drosophila_2:1629991_a_at:626:91; Interrogation_Position=3162; Antisense; AGTTACGATCGGTGATGGGCATTCC
>probe:Drosophila_2:1629991_a_at:538:457; Interrogation_Position=3296; Antisense; GATATGTCTCGATTGATAGCCGCCG
>probe:Drosophila_2:1629991_a_at:363:317; Interrogation_Position=3317; Antisense; GCCGGAAGATTGGATGCCCCTAGTC
>probe:Drosophila_2:1629991_a_at:289:89; Interrogation_Position=3338; Antisense; AGTCTGTTCATTCCCGGTTATGTAA
>probe:Drosophila_2:1629991_a_at:581:575; Interrogation_Position=3376; Antisense; GGCGACCATATCATATCGTACCTGT

Paste this into a BLAST search page for me
GTTGATGCAGCCGTAAAGCCCACAAGGAATCCATACTATACCCAGCTGGCCAGCTGGCGGATCCACTGAATTTGGGGATAATCCTTTGCGCTGCTACGTTAGATCTTGGAGGTGAACGCGTCGTCTTTCCTCTGGAAGCTCCTGTGGGAGGAGCCATTGGGCGTTCTATTGTGATGATTTTTGGACCAGATCACTCCCATATGAGCGTGCCCAGTTTCTGGATGAAGTTACGATCGGTGATGGGCATTCCGATATGTCTCGATTGATAGCCGCCGGCCGGAAGATTGGATGCCCCTAGTCAGTCTGTTCATTCCCGGTTATGTAAGGCGACCATATCATATCGTACCTGT

Full Affymetrix probeset data:

Annotations for 1629991_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720