FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630007_s_at:

>probe:Drosophila_2:1630007_s_at:200:407; Interrogation_Position=5214; Antisense; GACTGAGTGCTCCATTTGTCTAATG
>probe:Drosophila_2:1630007_s_at:235:479; Interrogation_Position=5296; Antisense; GTTTAAGCCTCTCACACAAACTGTG
>probe:Drosophila_2:1630007_s_at:464:589; Interrogation_Position=5319; Antisense; TGGATTGAATCTCGTGCGCACACAA
>probe:Drosophila_2:1630007_s_at:296:643; Interrogation_Position=5393; Antisense; TCATTTATTTCTCGGTTGGTTGCTA
>probe:Drosophila_2:1630007_s_at:256:87; Interrogation_Position=5432; Antisense; AGTCACTATTCTTACGTTTACCTAG
>probe:Drosophila_2:1630007_s_at:284:673; Interrogation_Position=5450; Antisense; TACCTAGTCGTTACAAAGCTCCAAT
>probe:Drosophila_2:1630007_s_at:624:641; Interrogation_Position=5480; Antisense; TCTATACGGATTGTTTTTCCCCACT
>probe:Drosophila_2:1630007_s_at:198:247; Interrogation_Position=5539; Antisense; AATTCGGTCCAATGCATACACACAC
>probe:Drosophila_2:1630007_s_at:635:101; Interrogation_Position=5570; Antisense; AGACGGCGTCGCACATAACCTACAA
>probe:Drosophila_2:1630007_s_at:178:671; Interrogation_Position=5612; Antisense; TACGATCGGCGATTTTGCAGTTTGC
>probe:Drosophila_2:1630007_s_at:602:527; Interrogation_Position=5637; Antisense; GGGAGCTAACATACCGATCCGGGTT
>probe:Drosophila_2:1630007_s_at:326:529; Interrogation_Position=5657; Antisense; GGGTTACCCTGAAATTGTCGACTTG
>probe:Drosophila_2:1630007_s_at:212:403; Interrogation_Position=5676; Antisense; GACTTGTGCCACATTCTCAAGACAA
>probe:Drosophila_2:1630007_s_at:522:467; Interrogation_Position=5745; Antisense; GTTGTAGACAAGACACCACTCCTTA

Paste this into a BLAST search page for me
GACTGAGTGCTCCATTTGTCTAATGGTTTAAGCCTCTCACACAAACTGTGTGGATTGAATCTCGTGCGCACACAATCATTTATTTCTCGGTTGGTTGCTAAGTCACTATTCTTACGTTTACCTAGTACCTAGTCGTTACAAAGCTCCAATTCTATACGGATTGTTTTTCCCCACTAATTCGGTCCAATGCATACACACACAGACGGCGTCGCACATAACCTACAATACGATCGGCGATTTTGCAGTTTGCGGGAGCTAACATACCGATCCGGGTTGGGTTACCCTGAAATTGTCGACTTGGACTTGTGCCACATTCTCAAGACAAGTTGTAGACAAGACACCACTCCTTA

Full Affymetrix probeset data:

Annotations for 1630007_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720