Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630095_a_at:

>probe:Drosophila_2:1630095_a_at:382:443; Interrogation_Position=4195; Antisense; GATGAACATTATTCACACCCACGAC
>probe:Drosophila_2:1630095_a_at:15:161; Interrogation_Position=4227; Antisense; ACAACTACACACTCGCTTGCATAGA
>probe:Drosophila_2:1630095_a_at:564:109; Interrogation_Position=4274; Antisense; AGAATGCCCTGCATCGTTTACAACC
>probe:Drosophila_2:1630095_a_at:708:189; Interrogation_Position=4304; Antisense; AACTTGTCCCAACTTGCTCGTATAA
>probe:Drosophila_2:1630095_a_at:384:599; Interrogation_Position=4355; Antisense; TGTCGCAATCGTTTCGTTGCTCAAT
>probe:Drosophila_2:1630095_a_at:119:241; Interrogation_Position=4405; Antisense; AATAATCTCCGCTTCTGGCAGGATA
>probe:Drosophila_2:1630095_a_at:45:25; Interrogation_Position=4446; Antisense; ATATGCAGCTGGCTTTTCGCTCAGT
>probe:Drosophila_2:1630095_a_at:676:19; Interrogation_Position=4473; Antisense; ATTTGTGAGTGTCTGCGTTCGCTTC
>probe:Drosophila_2:1630095_a_at:418:471; Interrogation_Position=4489; Antisense; GTTCGCTTCTCAAACTGTCACTTGG
>probe:Drosophila_2:1630095_a_at:134:183; Interrogation_Position=4528; Antisense; AAAATCTCCAGCTTAAGACGTCCCT
>probe:Drosophila_2:1630095_a_at:633:343; Interrogation_Position=4556; Antisense; GCTTGTGTACGCCTTTTAGTTGAAT
>probe:Drosophila_2:1630095_a_at:618:601; Interrogation_Position=4604; Antisense; TGTTTCTATCTCTGTATCCATTTCC
>probe:Drosophila_2:1630095_a_at:17:689; Interrogation_Position=4640; Antisense; TATTAATTTGCCTTTCCGTTAGCCA
>probe:Drosophila_2:1630095_a_at:640:473; Interrogation_Position=4657; Antisense; GTTAGCCAACTCAGGCGGCAACTTA

Paste this into a BLAST search page for me
GATGAACATTATTCACACCCACGACACAACTACACACTCGCTTGCATAGAAGAATGCCCTGCATCGTTTACAACCAACTTGTCCCAACTTGCTCGTATAATGTCGCAATCGTTTCGTTGCTCAATAATAATCTCCGCTTCTGGCAGGATAATATGCAGCTGGCTTTTCGCTCAGTATTTGTGAGTGTCTGCGTTCGCTTCGTTCGCTTCTCAAACTGTCACTTGGAAAATCTCCAGCTTAAGACGTCCCTGCTTGTGTACGCCTTTTAGTTGAATTGTTTCTATCTCTGTATCCATTTCCTATTAATTTGCCTTTCCGTTAGCCAGTTAGCCAACTCAGGCGGCAACTTA

Full Affymetrix probeset data:

Annotations for 1630095_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime