FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630227_a_at:

>probe:Drosophila_2:1630227_a_at:555:565; Interrogation_Position=3792; Antisense; GGCAATATGGCAATAGGCTCGTGAA
>probe:Drosophila_2:1630227_a_at:573:423; Interrogation_Position=3852; Antisense; GAGACAACCACATATACACCCAAAC
>probe:Drosophila_2:1630227_a_at:331:203; Interrogation_Position=3874; Antisense; AACCATATTGAATTAGGCACACGAA
>probe:Drosophila_2:1630227_a_at:225:555; Interrogation_Position=3903; Antisense; GGAGCCTACATAGTTTTCTCTGAGC
>probe:Drosophila_2:1630227_a_at:435:715; Interrogation_Position=3918; Antisense; TTCTCTGAGCTTTTTATTATACCCC
>probe:Drosophila_2:1630227_a_at:317:393; Interrogation_Position=3957; Antisense; GAAATGGACATCACAATGCGGAATG
>probe:Drosophila_2:1630227_a_at:205:95; Interrogation_Position=3998; Antisense; AGATTTCCACAGATCGAAGCACGAC
>probe:Drosophila_2:1630227_a_at:389:33; Interrogation_Position=4047; Antisense; ATCAATTCGCATTCCAACAGTTTAG
>probe:Drosophila_2:1630227_a_at:419:507; Interrogation_Position=4090; Antisense; GTGGGACCTATTATGTATTTTTGTA
>probe:Drosophila_2:1630227_a_at:570:255; Interrogation_Position=4119; Antisense; CAAAATTCTGTTTTTCACGCGAAAT
>probe:Drosophila_2:1630227_a_at:491:229; Interrogation_Position=4141; Antisense; AATGTTGAATCTGCCTGCGGGAGGT
>probe:Drosophila_2:1630227_a_at:501:435; Interrogation_Position=4161; Antisense; GAGGTCCGAAATGCGGGCCTGCAAA
>probe:Drosophila_2:1630227_a_at:96:331; Interrogation_Position=4173; Antisense; GCGGGCCTGCAAAATCTGGATGTAT
>probe:Drosophila_2:1630227_a_at:523:597; Interrogation_Position=4335; Antisense; TGTTCACTTTTGTACACACAACCAA

Paste this into a BLAST search page for me
GGCAATATGGCAATAGGCTCGTGAAGAGACAACCACATATACACCCAAACAACCATATTGAATTAGGCACACGAAGGAGCCTACATAGTTTTCTCTGAGCTTCTCTGAGCTTTTTATTATACCCCGAAATGGACATCACAATGCGGAATGAGATTTCCACAGATCGAAGCACGACATCAATTCGCATTCCAACAGTTTAGGTGGGACCTATTATGTATTTTTGTACAAAATTCTGTTTTTCACGCGAAATAATGTTGAATCTGCCTGCGGGAGGTGAGGTCCGAAATGCGGGCCTGCAAAGCGGGCCTGCAAAATCTGGATGTATTGTTCACTTTTGTACACACAACCAA

Full Affymetrix probeset data:

Annotations for 1630227_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720