FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630261_a_at:

>probe:Drosophila_2:1630261_a_at:539:109; Interrogation_Position=1031; Antisense; AGAAGGAGCAATACACCGGCCGTCA
>probe:Drosophila_2:1630261_a_at:576:133; Interrogation_Position=1044; Antisense; CACCGGCCGTCAAAAATCCAAACTG
>probe:Drosophila_2:1630261_a_at:133:235; Interrogation_Position=1058; Antisense; AATCCAAACTGCCAAAGTGGTTCGG
>probe:Drosophila_2:1630261_a_at:677:627; Interrogation_Position=1067; Antisense; TGCCAAAGTGGTTCGGCGAGCGACC
>probe:Drosophila_2:1630261_a_at:219:211; Interrogation_Position=1096; Antisense; AAGAAGGCCGGTGAGCCCGAGACAC
>probe:Drosophila_2:1630261_a_at:214:251; Interrogation_Position=1140; Antisense; CAAGGCCGATGAGGACATCGTCGAG
>probe:Drosophila_2:1630261_a_at:356:57; Interrogation_Position=1148; Antisense; ATGAGGACATCGTCGAGGATGATGA
>probe:Drosophila_2:1630261_a_at:160:565; Interrogation_Position=1311; Antisense; GGAATAGACCAATCCACACTCTGGG
>probe:Drosophila_2:1630261_a_at:649:483; Interrogation_Position=1440; Antisense; GTAGTTAACAACTTGCTATTCAAAA
>probe:Drosophila_2:1630261_a_at:123:255; Interrogation_Position=1474; Antisense; CAACATCTTTTTTATTGAATCGAGA
>probe:Drosophila_2:1630261_a_at:20:595; Interrogation_Position=936; Antisense; TGTGGACACCCGCTCTTATGACGAC
>probe:Drosophila_2:1630261_a_at:207:157; Interrogation_Position=941; Antisense; ACACCCGCTCTTATGACGACAAGAA
>probe:Drosophila_2:1630261_a_at:148:379; Interrogation_Position=966; Antisense; GAAGCTCTTCGAGGGTGGCTGGGAT
>probe:Drosophila_2:1630261_a_at:273:607; Interrogation_Position=990; Antisense; TGAGATCTCCAAGGACTCGAACGAG

Paste this into a BLAST search page for me
AGAAGGAGCAATACACCGGCCGTCACACCGGCCGTCAAAAATCCAAACTGAATCCAAACTGCCAAAGTGGTTCGGTGCCAAAGTGGTTCGGCGAGCGACCAAGAAGGCCGGTGAGCCCGAGACACCAAGGCCGATGAGGACATCGTCGAGATGAGGACATCGTCGAGGATGATGAGGAATAGACCAATCCACACTCTGGGGTAGTTAACAACTTGCTATTCAAAACAACATCTTTTTTATTGAATCGAGATGTGGACACCCGCTCTTATGACGACACACCCGCTCTTATGACGACAAGAAGAAGCTCTTCGAGGGTGGCTGGGATTGAGATCTCCAAGGACTCGAACGAG

Full Affymetrix probeset data:

Annotations for 1630261_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720