FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630269_s_at:

>probe:Drosophila_2:1630269_s_at:52:353; Interrogation_Position=3429; Antisense; GCAGCAGCAGTTAACGCAACGCACA
>probe:Drosophila_2:1630269_s_at:409:359; Interrogation_Position=3444; Antisense; GCAACGCACAGATTACTTAGCATAA
>probe:Drosophila_2:1630269_s_at:123:31; Interrogation_Position=3487; Antisense; ATAAACCGATGAACCGATGAAAGCG
>probe:Drosophila_2:1630269_s_at:671:331; Interrogation_Position=3509; Antisense; GCGGCGGATAAAACATTATCGTCTA
>probe:Drosophila_2:1630269_s_at:110:43; Interrogation_Position=3526; Antisense; ATCGTCTACCGATAAGTCTTGAACA
>probe:Drosophila_2:1630269_s_at:25:33; Interrogation_Position=3537; Antisense; ATAAGTCTTGAACAGCAACAGCATT
>probe:Drosophila_2:1630269_s_at:586:343; Interrogation_Position=3557; Antisense; GCATTACTATTTATTAGTCGTCGAG
>probe:Drosophila_2:1630269_s_at:254:501; Interrogation_Position=3573; Antisense; GTCGTCGAGAATTTGTAAAAGTGTC
>probe:Drosophila_2:1630269_s_at:10:23; Interrogation_Position=3631; Antisense; ATATATATACATAGGCTGGCGTTCG
>probe:Drosophila_2:1630269_s_at:85:575; Interrogation_Position=3644; Antisense; GGCTGGCGTTCGATTAGTGTTTAAT
>probe:Drosophila_2:1630269_s_at:105:679; Interrogation_Position=3758; Antisense; TATACAATAGCGGAGTGGAGTTAAC
>probe:Drosophila_2:1630269_s_at:171:473; Interrogation_Position=3777; Antisense; GTTAACGCGAGAAACATATTAGCAT
>probe:Drosophila_2:1630269_s_at:700:21; Interrogation_Position=3820; Antisense; ATATTTACAACCAATTCGCCGAAAG
>probe:Drosophila_2:1630269_s_at:145:437; Interrogation_Position=3930; Antisense; GAGGAGACCCTATTTAAATCTAATA

Paste this into a BLAST search page for me
GCAGCAGCAGTTAACGCAACGCACAGCAACGCACAGATTACTTAGCATAAATAAACCGATGAACCGATGAAAGCGGCGGCGGATAAAACATTATCGTCTAATCGTCTACCGATAAGTCTTGAACAATAAGTCTTGAACAGCAACAGCATTGCATTACTATTTATTAGTCGTCGAGGTCGTCGAGAATTTGTAAAAGTGTCATATATATACATAGGCTGGCGTTCGGGCTGGCGTTCGATTAGTGTTTAATTATACAATAGCGGAGTGGAGTTAACGTTAACGCGAGAAACATATTAGCATATATTTACAACCAATTCGCCGAAAGGAGGAGACCCTATTTAAATCTAATA

Full Affymetrix probeset data:

Annotations for 1630269_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720