FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630316_a_at:

>probe:Drosophila_2:1630316_a_at:422:111; Interrogation_Position=3047; Antisense; AGCAAGGAAACACCGTATCCACGCC
>probe:Drosophila_2:1630316_a_at:104:543; Interrogation_Position=3088; Antisense; GGATTTGCTAAGTTCGTTAAGGACA
>probe:Drosophila_2:1630316_a_at:440:73; Interrogation_Position=3107; Antisense; AGGACAACTTCCAGAGACACAAGCG
>probe:Drosophila_2:1630316_a_at:1:107; Interrogation_Position=3121; Antisense; AGACACAAGCGCGACAACATGACTG
>probe:Drosophila_2:1630316_a_at:455:445; Interrogation_Position=3156; Antisense; GATGCGCATCCTGAGCGTGGAGTAC
>probe:Drosophila_2:1630316_a_at:352:389; Interrogation_Position=3238; Antisense; GAAACGCTGACACTGGACGAGTCGT
>probe:Drosophila_2:1630316_a_at:590:409; Interrogation_Position=3253; Antisense; GACGAGTCGTCCAACTAGCTGGGTT
>probe:Drosophila_2:1630316_a_at:486:253; Interrogation_Position=3264; Antisense; CAACTAGCTGGGTTCTCTTTTGAGT
>probe:Drosophila_2:1630316_a_at:209:475; Interrogation_Position=3292; Antisense; GTTAAATTATGTGCTCCAAGCCCTA
>probe:Drosophila_2:1630316_a_at:200:615; Interrogation_Position=3303; Antisense; TGCTCCAAGCCCTAAACCATTTTTG
>probe:Drosophila_2:1630316_a_at:482:207; Interrogation_Position=3466; Antisense; AAGCTAGTGCTGTAAAGCTCGATTT
>probe:Drosophila_2:1630316_a_at:569:117; Interrogation_Position=3481; Antisense; AGCTCGATTTTGCATAGCCGGTGTC
>probe:Drosophila_2:1630316_a_at:452:537; Interrogation_Position=3519; Antisense; GGTAAAGGCGATGCTTGGACTCATT
>probe:Drosophila_2:1630316_a_at:98:345; Interrogation_Position=3531; Antisense; GCTTGGACTCATTACTTACAGTGAA

Paste this into a BLAST search page for me
AGCAAGGAAACACCGTATCCACGCCGGATTTGCTAAGTTCGTTAAGGACAAGGACAACTTCCAGAGACACAAGCGAGACACAAGCGCGACAACATGACTGGATGCGCATCCTGAGCGTGGAGTACGAAACGCTGACACTGGACGAGTCGTGACGAGTCGTCCAACTAGCTGGGTTCAACTAGCTGGGTTCTCTTTTGAGTGTTAAATTATGTGCTCCAAGCCCTATGCTCCAAGCCCTAAACCATTTTTGAAGCTAGTGCTGTAAAGCTCGATTTAGCTCGATTTTGCATAGCCGGTGTCGGTAAAGGCGATGCTTGGACTCATTGCTTGGACTCATTACTTACAGTGAA

Full Affymetrix probeset data:

Annotations for 1630316_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720