FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630329_at:

>probe:Drosophila_2:1630329_at:114:71; Interrogation_Position=7004; Antisense; AGGCCCACGAGAAGTTCCGCTTTGA
>probe:Drosophila_2:1630329_at:523:525; Interrogation_Position=7036; Antisense; GGGCATGTGGCCAATTTCCTGCGTC
>probe:Drosophila_2:1630329_at:304:721; Interrogation_Position=7051; Antisense; TTCCTGCGTCCGTATCGCAAGGAGA
>probe:Drosophila_2:1630329_at:252:103; Interrogation_Position=7073; Antisense; AGAGCTGCACGCTGGGTCGGATCAC
>probe:Drosophila_2:1630329_at:497:571; Interrogation_Position=7130; Antisense; GGCTAAGCTATCATATTACCACCAA
>probe:Drosophila_2:1630329_at:687:689; Interrogation_Position=7165; Antisense; TATTGCGAGGTCAGCGGGAATCCCC
>probe:Drosophila_2:1630329_at:452:597; Interrogation_Position=7190; Antisense; TGTCCTGCACGGAGTCTGTGAAGCA
>probe:Drosophila_2:1630329_at:240:285; Interrogation_Position=7205; Antisense; CTGTGAAGCACAAGTCCTACGACTT
>probe:Drosophila_2:1630329_at:121:403; Interrogation_Position=7225; Antisense; GACTTCATCAATCAGTACATGCGGC
>probe:Drosophila_2:1630329_at:602:105; Interrogation_Position=7298; Antisense; AGAAATTGTGTTCTTCTGCGGCACC
>probe:Drosophila_2:1630329_at:398:623; Interrogation_Position=7314; Antisense; TGCGGCACCAGAAATCGAACCTGAA
>probe:Drosophila_2:1630329_at:39:361; Interrogation_Position=7336; Antisense; GAACCAAATCCCACACGGAACTAGA
>probe:Drosophila_2:1630329_at:81:707; Interrogation_Position=7382; Antisense; TTAGTTAAGCACATTCGACCCCTAG
>probe:Drosophila_2:1630329_at:418:679; Interrogation_Position=7404; Antisense; TAGGATGCGATCTACCCCTCGTAGT

Paste this into a BLAST search page for me
AGGCCCACGAGAAGTTCCGCTTTGAGGGCATGTGGCCAATTTCCTGCGTCTTCCTGCGTCCGTATCGCAAGGAGAAGAGCTGCACGCTGGGTCGGATCACGGCTAAGCTATCATATTACCACCAATATTGCGAGGTCAGCGGGAATCCCCTGTCCTGCACGGAGTCTGTGAAGCACTGTGAAGCACAAGTCCTACGACTTGACTTCATCAATCAGTACATGCGGCAGAAATTGTGTTCTTCTGCGGCACCTGCGGCACCAGAAATCGAACCTGAAGAACCAAATCCCACACGGAACTAGATTAGTTAAGCACATTCGACCCCTAGTAGGATGCGATCTACCCCTCGTAGT

Full Affymetrix probeset data:

Annotations for 1630329_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720