FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630335_s_at:

>probe:Drosophila_2:1630335_s_at:286:423; Interrogation_Position=1847; Antisense; GAGAACCTCATGATCTACCTGGCCA
>probe:Drosophila_2:1630335_s_at:191:579; Interrogation_Position=1866; Antisense; TGGCCACGTTCATCAAGTTCCTCAA
>probe:Drosophila_2:1630335_s_at:563:613; Interrogation_Position=1911; Antisense; TGAACCTGCAGTGCCTGGAGATCTA
>probe:Drosophila_2:1630335_s_at:493:551; Interrogation_Position=1927; Antisense; GGAGATCTATCCCACGTGCATGCGA
>probe:Drosophila_2:1630335_s_at:658:273; Interrogation_Position=1975; Antisense; CATTCTGGCCAACGCTATCGGAGTC
>probe:Drosophila_2:1630335_s_at:301:705; Interrogation_Position=2050; Antisense; TTACTACATCCTGGGCGTTCTCTTT
>probe:Drosophila_2:1630335_s_at:195:109; Interrogation_Position=2121; Antisense; AGAAGCTGCCGGACACCATGGAGGA
>probe:Drosophila_2:1630335_s_at:484:63; Interrogation_Position=2142; Antisense; AGGAGGCGGGTCACTTTGGCAAACA
>probe:Drosophila_2:1630335_s_at:113:161; Interrogation_Position=2171; Antisense; AAATTCTTCAGTCTGCCGAAACCGC
>probe:Drosophila_2:1630335_s_at:68:207; Interrogation_Position=2219; Antisense; AAGCTGTCATCCCATCCGGAGTTAA
>probe:Drosophila_2:1630335_s_at:357:91; Interrogation_Position=2238; Antisense; AGTTAACCAGGCTCAGACGCTCGGA
>probe:Drosophila_2:1630335_s_at:9:367; Interrogation_Position=2290; Antisense; GAATCCGAATCCTCGAGTCCTGCTA
>probe:Drosophila_2:1630335_s_at:57:319; Interrogation_Position=2374; Antisense; GCGCCCCTTGTGATGTTACGTTAAG
>probe:Drosophila_2:1630335_s_at:640:91; Interrogation_Position=2397; Antisense; AGTTTGGCCCCAAGTATTGCGAATA

Paste this into a BLAST search page for me
GAGAACCTCATGATCTACCTGGCCATGGCCACGTTCATCAAGTTCCTCAATGAACCTGCAGTGCCTGGAGATCTAGGAGATCTATCCCACGTGCATGCGACATTCTGGCCAACGCTATCGGAGTCTTACTACATCCTGGGCGTTCTCTTTAGAAGCTGCCGGACACCATGGAGGAAGGAGGCGGGTCACTTTGGCAAACAAAATTCTTCAGTCTGCCGAAACCGCAAGCTGTCATCCCATCCGGAGTTAAAGTTAACCAGGCTCAGACGCTCGGAGAATCCGAATCCTCGAGTCCTGCTAGCGCCCCTTGTGATGTTACGTTAAGAGTTTGGCCCCAAGTATTGCGAATA

Full Affymetrix probeset data:

Annotations for 1630335_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720